DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9281 and ABCF5

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_201289.1 Gene:ABCF5 / 836607 AraportID:AT5G64840 Length:692 Species:Arabidopsis thaliana


Alignment Length:610 Identity:190/610 - (31%)
Similarity:312/610 - (51%) Gaps:36/610 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QIPSTKKANGVPERELTEEEKLCAKLEEEARISAEARSCTGSLAVHPRSRDVKIANFSITFFGSE 87
            |:.:......|.:|: .|.|.|.:|...:.....:....:........|..||:.|...::.|..
plant    48 QVSTISLETSVKQRQ-DEIESLFSKQPSQQDSDRKRNGKSSKNGASGISSGVKLENIRKSYKGVT 111

  Fly    88 LLQDTMLELNCGRRYGLIGLNGCGKSSLLAVLGGREVP-------VPPHIDIFHLTREIPAS-SK 144
            :|:|...|:..|.:.||:|:||.||::.|.::.|:|.|       ..|::.:..|::|...| ||
plant   112 VLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSK 176

  Fly   145 -------SALQCVMEVDEERIKLEKLAEELAMSEED-DAQEQLIDIYE----RLDDMSADLAEVK 197
                   :|.:..||:.|   ||||:.:.:..|.:| |...:|:|.::    |...::.|..:.|
plant   177 TVREEFMTAFKEEMEITE---KLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDSVDAK 238

  Fly   198 AARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLDLDACVWLEEELK 262
            .::::..|||......:....|||||:||::|.:.|...|.||||||||||||||...|||..|:
plant   239 ISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQ 303

  Fly   263 TYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQISH 327
            .....:|:|||.:.||:.:||.|:.......:.:.|||..:|.::.|.:|.|...:..:|..|..
plant   304 KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTFEGNYSQYVISKAEWIETQNAAWEKQQKDIDS 368

  Fly   328 MKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVSDDKVLNFYFPSCGKVPPPVIMVQNVN 392
            .|:.|||.|.|:.  :.:|.:.||.|.|:..|.|.||....|.:...||..|.....|:.|:|::
plant   369 TKDLIARLGAGAN--SGRASTAEKKLEKLQEQELIEKPFQRKQMKIRFPERGTSGRSVVNVKNID 431

  Fly   393 FRYNDETPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRIARY-H 456
            |.:.|:  .::|.....|:...::|::||||.||||||||:.|...|..|.:....|..:..| .
plant   432 FGFEDK--MLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFE 494

  Fly   457 QHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQVCPIRQLSDGQRCRVVFAWLA 521
            |:..|:||||.:.||.:..|..|.: .::::.::||...........:..||.|::.|:.|....
plant   495 QNQAEVLDLDKTVLETVCEAAEDWR-SDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558

  Fly   522 WQVPHLLLLDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWVCEKETVTKWKG 586
            .....||:|||||||||:.:.:.|.:|||::.|.::.||||...|.|:...:...|...:..:.|
plant   559 VTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAG 623

  Fly   587 GILDYKDHLKNKI---TSENEKKAK 608
               ||..:|:..:   |.|.|::|:
plant   624 ---DYNYYLEKNLDARTKELEREAE 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 179/546 (33%)
ABCF_EF-3 74..292 CDD:213188 81/237 (34%)
ABC_tran_Xtn 286..373 CDD:289608 25/86 (29%)
ABCF_EF-3 386..578 CDD:213188 63/192 (33%)
ABCF5NP_201289.1 Uup 99..631 CDD:223562 177/542 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D580544at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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