DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9281 and ABCF4

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001327731.1 Gene:ABCF4 / 824619 AraportID:AT3G54540 Length:723 Species:Arabidopsis thaliana


Alignment Length:649 Identity:267/649 - (41%)
Similarity:396/649 - (61%) Gaps:66/649 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EAQKKKDARNK-KIQQ----IPSTKKANGVPERELTEEEKLCAKLEEEAR--------------I 54
            |.:::|:||.| |.:|    |..|.|    .:::...:|:|..:..|.|:              |
plant    83 EEERQKEARRKLKSEQRHLEISVTDK----EQKKREAKERLALQAAESAKREAMKDDHDAFTVVI 143

  Fly    55 SAEARSCTGSLAVHPRSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNGCGKSSLLAVL 119
            .::.....|........:|:.|.:||::..|.|||::..:.::.|:||||||.||.|||:||.:|
plant   144 GSKTSVLEGDDMADANVKDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLL 208

  Fly   120 GGREVPVPPHIDIFHLTREIPASSKSALQCVMEVDEERIKLEKLAEELAMS------------EE 172
            ..|::|||.:||:..:.:|:....||||..|:..:||.:||.:.||.|..|            ::
plant   209 AWRKIPVPKNIDVLLVEQEVVGDEKSALNAVVSANEELVKLREEAEALQKSSSGADGENVDGEDD 273

  Fly   173 DDAQEQLIDIYERLDDMSADLAEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKP 237
            ||..|:|.::|:||..:.:|.||.:|::||.||||.|.||.:..:.|||||||||:|||||||:|
plant   274 DDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISLARALFVQP 338

  Fly   238 HLLLLDEPTNHLDLDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEA 302
            .|||||||||||||.|.:||||.|..:|:.||::||.:||||.|||.||||..:.|.:|.||::.
plant   339 TLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQNLHFYRGNFDG 403

  Fly   303 F----------VRTRMELLENQMKQ-----YNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKT 352
            |          :..:.::.:.|||.     ...:|:::.....:.|      ||.|.:::||.||
plant   404 FESGYEQRRKEMNKKFDVYDKQMKAAKRTGNRGQQEKVKDRAKFTA------AKEASKSKSKGKT 462

  Fly   353 L-AKMVAQGLTEKVSDDKVLNFYFPSCGKVPPPVIMVQNVNFRYNDETPWIYKNLEFGIDLDTRL 416
            : .:..|.....|..|..|: |:||...::.||::.:..|:|.|.:...:...|::.|||:.||:
plant   463 VDEEGPAPEAPRKWRDYSVV-FHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRV 526

  Fly   417 ALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRIARYHQHLHELLDLDASPLEYMMRAFPD-- 479
            |:||||||||||||.||.||||||.|.:|::..|||.||.||..:||.:..:|::|::|..||  
plant   527 AIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPDQE 591

  Fly   480 -VKEKEEMRKIIGRYGLTGRQQVCPIRQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETID 543
             ..::|.:|..:|::||.....:.||.:||.||:.||||..::...||:||||||||||||::||
plant   592 GFSKQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSID 656

  Fly   544 ALADAINDFDGGMVLVSHDFRLINQV-AEE----IWVCEKETVTKWKGGILDYKDHLKNKITSE 602
            |||||:::|.||:||||||.|||::| |||    |||.|..||..:.|...:||:.|:.:|.:|
plant   657 ALADALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVVEDGTVNFFPGTFEEYKEDLQREIKAE 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 249/561 (44%)
ABCF_EF-3 74..292 CDD:213188 114/229 (50%)
ABC_tran_Xtn 286..373 CDD:289608 24/102 (24%)
ABCF_EF-3 386..578 CDD:213188 101/199 (51%)
ABCF4NP_001327731.1 PLN03073 45..714 CDD:215558 264/641 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D580544at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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