DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9281 and Abcf3

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001011896.1 Gene:Abcf3 / 287982 RGDID:1310468 Length:709 Species:Rattus norvegicus


Alignment Length:605 Identity:250/605 - (41%)
Similarity:370/605 - (61%) Gaps:25/605 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKKREAQKKKDARNKKIQQIPSTKKANGVPERELTEEEKLC-AKLEEEARISAEARSCTGSLAVH 68
            |||.|   |.:||.|..|:..|.|:........:.||.... |...:|:|:.:..::        
  Rat   120 AKKLE---KAEARLKAKQEKRSEKETLKTSSPLVLEEASASQAGSRKESRLESSGKN-------- 173

  Fly    69 PRSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNGCGKSSLLAVLGGREVPVPPHIDIF 133
             :|.||:|.||.::|....||....:.|..||||||:|.||.||::||.:|..|.:.||.||.:.
  Rat   174 -KSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLL 237

  Fly   134 HLTREIPASSKSALQCVMEVD---EERIKLEK-LAEELAMSEEDDAQEQLI-DIYERLDDMSADL 193
            |:.:|:......|||.|:|.|   |:.::.|: |:.::|....:.::..|: ::|.:|:::.||.
  Rat   238 HVEQEVAGDDTPALQSVLESDTIREDLLRQERGLSLKIAAGRAEGSEAALLAEVYTKLEEIEADK 302

  Fly   194 AEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLDLDACVWLE 258
            |..:|:.||.||||...|||:..::||||||||:|||||||.:|.|||||||||.||:.|.:|||
  Rat   303 APARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLE 367

  Fly   259 EELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEAFVRTRMELLENQMKQYNWEQD 323
            ..|:|:...::::||.::|||.:.|:||||..:||..|.|::|.|::::.|.|.||.::|..:|.
  Rat   368 NYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQQ 432

  Fly   324 QISHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVSDDKVLNFYFP-SCGKVPPPVIM 387
            ...|::.:|.||.: :|..|.|.|||.|.|.|:......:|.| :.||.  || ...|..||::.
  Rat   433 YRQHIQVFIDRFRY-NANRASQVQSKLKMLEKLPELKPVDKES-EVVLK--FPDGFEKFSPPILQ 493

  Fly   388 VQNVNFRYNDETPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRI 452
            :..|:| |.|....|:..|....||::|:.:||.|||||||:||||.|||.|..|:...:.:|:|
  Rat   494 LDEVDF-YYDPKHIIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLAPVRGIRHAHRNLKI 557

  Fly   453 ARYHQHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQVCPIRQLSDGQRCRVVF 517
            ..:.||..|.|||:.|.:|.:.|.||. :.:||.|..:||||::|...:.|:..||.||:.||.|
  Rat   558 GYFSQHHVEQLDLNVSAVELLARKFPG-RPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAF 621

  Fly   518 AWLAWQVPHLLLLDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWVCEKETVT 582
            |.:....|:..:|||||||||||||:||..|:|:|.||:||||||.|.|..|.:|:|||||.:||
  Rat   622 AQMTMPCPNFYILDEPTNHLDMETIEALGHALNNFRGGVVLVSHDERFIRLVCKELWVCEKGSVT 686

  Fly   583 KWKGGILDYKDHLKNKITSE 602
            :.:||...|:..|:.:...|
  Rat   687 RVEGGFDQYRALLQEQFRRE 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 233/531 (44%)
ABCF_EF-3 74..292 CDD:213188 98/222 (44%)
ABC_tran_Xtn 286..373 CDD:289608 32/86 (37%)
ABCF_EF-3 386..578 CDD:213188 91/191 (48%)
Abcf3NP_001011896.1 ABCF_EF-3 178..401 CDD:213188 98/222 (44%)
P-loop_NTPase 266..>363 CDD:304359 46/96 (48%)
ABC_tran_Xtn 395..477 CDD:289608 30/83 (36%)
ABCF_EF-3 492..683 CDD:213188 92/192 (48%)
PLN03073 6..700 CDD:215558 248/597 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..171 10/41 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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