DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9281 and Abcf1

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_038882.1 Gene:Abcf1 / 224742 MGIID:1351658 Length:837 Species:Mus musculus


Alignment Length:634 Identity:245/634 - (38%)
Similarity:366/634 - (57%) Gaps:60/634 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SAAKKREAQKKKDARNKKIQQIPSTK--------KANGVPERELT--EEEKLCAKLEEEARI--- 54
            :|.:|...|:.||...|:.:|....:        |||. |...|:  |::||..:::.|.::   
Mouse   203 TAKEKEPPQQGKDRDKKEAEQGSGEEKEEKEGDLKAND-PYANLSKKEKKKLKKQMDYERQVESL 266

  Fly    55 ----------SAEARSCTGSLAVHPRSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNG 109
                      |......:...|:...:.|:|:..|||:..|.||..:..|.:..||||||:|.||
Mouse   267 KAANAAENDFSVSQAEVSSRQAMLENASDIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNG 331

  Fly   110 CGKSSLLAVLGGREVPVPPHIDIFHLTREIPASSKSALQCVMEVDEERIKLEKLAEELAM----- 169
            .||::||..:..|.:.:||:||:....:|:.|....|:|.|:..|.:|::|  |.||..:     
Mouse   332 KGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRL--LEEERRLQGQLE 394

  Fly   170 SEEDDAQEQLIDIYERLDDMSADLAEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALF 234
            ..:|.|.|:|..:||.|....|..||.||.|||.|||||..||.:..:.||||||||::||||||
Mouse   395 QGDDTAAEKLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALF 459

  Fly   235 VKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGN 299
            ::|.||:||||||||||:|.:||...|:.:::.|:::||.|.||:.|||:||||..:||.||.||
Mouse   460 MEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRGN 524

  Fly   300 YEAFVRTRMELLENQMKQYNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEK 364
            |..|.:...:..:..:|||..::.::..:|        ...|..:||:.:.|.:.....|....|
Mouse   525 YMTFKKMYQQKQKELLKQYEKQEKKLKELK--------AGGKSTKQAEKQTKEVLTRKQQKCRRK 581

  Fly   365 VSDDK--------------VLNFYFPSCGKVPPPVIMVQNVNFRYNDETPWIYKNLEFGIDLDTR 415
            ..|::              .:.|.||....:.|||:.:..|.|.|..:.| ::|||:||||:|:|
Mouse   582 NQDEESQEPPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKP-LFKNLDFGIDMDSR 645

  Fly   416 LALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRIARYHQHLHELLDLDASPLEYMMRAF--P 478
            :.:|||||.||||||.||.|.|.||:|.:|||..|:|..::|...|.|.::.:|.||:.|:|  |
Mouse   646 ICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRSFNLP 710

  Fly   479 DVKEKEEMRKIIGRYGLTGRQQVCPIRQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETID 543
                .::.||.:||:||........|.:||.||:.|||||.||.:.|.:|:||||||:||:|:||
Mouse   711 ----YQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESID 771

  Fly   544 ALADAINDFDGGMVLVSHDFRLINQVAEEIWVCEKETVTKWKGGILDYK 592
            ||.:||||:.|.:::||||.|||.:...::||.|::.|::..|...|||
Mouse   772 ALGEAINDYKGAVIVVSHDARLITETNCQLWVVEEQGVSQIDGDFDDYK 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 227/543 (42%)
ABCF_EF-3 74..292 CDD:213188 103/222 (46%)
ABC_tran_Xtn 286..373 CDD:289608 22/100 (22%)
ABCF_EF-3 386..578 CDD:213188 92/193 (48%)
Abcf1NP_038882.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..256 15/53 (28%)
Uup 294..825 CDD:223562 227/542 (42%)
ABCF_EF-3 296..517 CDD:213188 103/222 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 551..599 8/55 (15%)
ABCF_EF-3 619..808 CDD:213188 93/193 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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