DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9281 and abcf1

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002939514.2 Gene:abcf1 / 100490104 XenbaseID:XB-GENE-993168 Length:884 Species:Xenopus tropicalis


Alignment Length:619 Identity:244/619 - (39%)
Similarity:366/619 - (59%) Gaps:69/619 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSAAKKREAQKKKDARNKKIQQIPSTKKAN------GVPERELTEEEKLCAKLEEEARISAEARS 60
            ::.:||.:.:|||....:|  |:.:.||..      .|.:.||:..:   |.||           
 Frog   288 ANLSKKEKKKKKKMLEYEK--QVATMKKITAAENDFSVSQAELSSRQ---AMLE----------- 336

  Fly    61 CTGSLAVHPRSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNGCGKSSLLAVLGGREVP 125
                     .:.|:||..|||:..|.||..:..|.:..||||||:|.||.||::||..:..:.:.
 Frog   337 ---------NASDIKIEKFSISAHGKELFVNADLYVVAGRRYGLVGPNGKGKTTLLKHIANKALN 392

  Fly   126 VPPHIDIFHLTREIPASSKSALQCVMEVDEERIKLEKLAEELAMSE-----EDDAQEQLIDIYER 185
            :||:||:....:|:.|....|:|.|::.|::|:||  |.||..:..     :|:|.|:|..:||.
 Frog   393 IPPNIDVLLCEQEVVADDTPAVQAVLKADKKRLKL--LEEERKLQTRLEKGDDNAAERLEKVYEE 455

  Fly   186 LDDMSADLAEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLD 250
            |..|.|..||.||.|||.||||...||.::.:.||||||||::||||||::|.||:|||||||||
 Frog   456 LRAMGAASAEAKARRILAGLGFTPEMQDRETRRFSGGWRMRVSLARALFMEPTLLMLDEPTNHLD 520

  Fly   251 LDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEAFVRTRMELLENQM 315
            |:|.:||...|:.:|:.|:::||.|.||:.|||:|:||..::|.||.|||..|.:...:..:...
 Frog   521 LNAVIWLNNYLQGWKKTLLIVSHDQGFLDDVCTDIMHLDSQKLYYYRGNYMTFKKMYQQKQKELQ 585

  Fly   316 KQYNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVSDDK----------- 369
            |||:.::.::..:|     .|..|||.| :.|:||....|   |...:|.::||           
 Frog   586 KQYDKQEKKLKDLK-----AGGKSAKQA-EKQTKEALTRK---QQKCQKKNNDKEDNDPVELLKR 641

  Fly   370 ----VLNFYFPSCGKVPPPVIMVQNVNFRYNDETPWIYKNLEFGIDLDTRLALVGPNGAGKSTLL 430
                .:.|.||:...:.||::.:..|:|.|:.:.| ::|||:||||:|:|:.:|||||.||||||
 Frog   642 PKEYTVKFTFPNPPPLSPPILGLHGVDFCYSGQKP-LFKNLDFGIDMDSRVCIVGPNGVGKSTLL 705

  Fly   431 KLLYGDLVPTSGMIRKNSHLRIARYHQHLHELLDLDASPLEYMMRAF--PDVKEKEEMRKIIGRY 493
            .||.|.|.||.|.:|||..|:|..::|...:.|:::.:..||:.|.|  |    .::.||.:||:
 Frog   706 LLLTGKLTPTKGEMRKNHRLKIGFFNQQYADQLNMEETATEYLQRNFNLP----YQDARKCLGRF 766

  Fly   494 GLTGRQQVCPIRQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETIDALADAINDFDGGMVL 558
            ||........|.:||.||:.|||||.|..:.|.:|:||||||:||:|:|||||:|:|::.|.::.
 Frog   767 GLESHAHTIQICKLSGGQKARVVFAELCCREPDVLILDEPTNNLDIESIDALAEAVNEYKGAVIT 831

  Fly   559 VSHDFRLINQVAEEIWVCEKETVTKWKGGILDYK 592
            ||||.|||.:....:||.|.:||.:.:|...|||
 Frog   832 VSHDARLITETNCHLWVVEDQTVNQIEGDFDDYK 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 229/544 (42%)
ABCF_EF-3 74..292 CDD:213188 104/222 (47%)
ABC_tran_Xtn 286..373 CDD:289608 26/101 (26%)
ABCF_EF-3 386..578 CDD:213188 88/193 (46%)
abcf1XP_002939514.2 LYRIC <157..>251 CDD:374019
Uup 339..870 CDD:223562 229/543 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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