DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9281 and abcf3

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_017206710.1 Gene:abcf3 / 100331227 ZFINID:ZDB-GENE-050517-32 Length:710 Species:Danio rerio


Alignment Length:604 Identity:247/604 - (40%)
Similarity:368/604 - (60%) Gaps:22/604 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AAKKREAQKKKDARNKKIQQIPSTKKANGVPERELTEEEKLCAKLEEEARISAEARSCTGSLAVH 68
            |.|..:|:.|..|::::..:..|.|.::.:...|.:..:   |..::|.|:.:..::        
Zfish   121 AKKLEKAEAKLKAKHERRNEKDSQKSSSQLVLEEASASQ---ASSKKENRVDSSGKN-------- 174

  Fly    69 PRSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNGCGKSSLLAVLGGREVPVPPHIDIF 133
             ||.|::|.||.::|....|||...|.|..||||||:|.||.||::||.:|..|.:.||.||.|.
Zfish   175 -RSYDIRIENFDVSFGERCLLQGAELCLASGRRYGLVGRNGLGKTTLLKMLASRSLRVPLHISIL 238

  Fly   134 HLTREIPASSKSALQCVMEVD---EERIKLE-KLAEELAMSEEDDAQE-QLIDIYERLDDMSADL 193
            |:.:|:......|||.|:|.|   ||.:|.| :|...:|....:..:. :|.::|.:|:::.||.
Zfish   239 HVEQEVDGDETLALQSVLESDTLREELLKEERRLNTHIANGTAEGLESVRLSEVYAKLEEIEADK 303

  Fly   194 AEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLDLDACVWLE 258
            |..:|:.||.||||...|||:..|:||||||||:|||||||.:|.|||||||||.||:.|.:|||
Zfish   304 APARASVILAGLGFTSKMQQQATKEFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLE 368

  Fly   259 EELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEAFVRTRMELLENQMKQYNWEQD 323
            ..|:|::..::::||.::|||.|.|::|||..:||:.|.|:||.|::|:.:.|:||.::|..:..
Zfish   369 NYLQTWQSTILVVSHDRNFLNAVVTDVIHLHSQRLESYRGDYENFIKTKEDRLKNQQREYEAQLQ 433

  Fly   324 QISHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVSDDKVLNFYFPSCGKVPPPVIMV 388
            ...|::.:|.||.: :|..|.|.|||.|.|.|:  ..|...|.:.:|...:..:..|:.||::.:
Zfish   434 YREHIQVFIDRFRY-NANRAAQVQSKLKLLEKL--PELKPMVKESEVALRFPDNFEKLSPPILQL 495

  Fly   389 QNVNFRYNDETPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRIA 453
            ..|.|.|:.|.. ::..|....||::|:.:||.||||||||||||.|:|.|..|....:..|:|.
Zfish   496 DEVEFGYSPEQR-LFSGLCISADLESRICIVGENGAGKSTLLKLLMGELTPLGGARHAHRKLKIG 559

  Fly   454 RYHQHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQVCPIRQLSDGQRCRVVFA 518
            .:.||..:.|||:...:|.:::.||...| ||.|..:||||:||.....|:..||.||:.||.||
Zfish   560 YFSQHHVDQLDLNVCSIELLLKRFPGETE-EEYRHQLGRYGITGELATRPVASLSGGQKSRVAFA 623

  Fly   519 WLAWQVPHLLLLDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWVCEKETVTK 583
            .:....|:..:|||||||||||||:|||.|:|.|.||:||||||.|||..|.:|:||||...|.:
Zfish   624 QMTMPCPNFYILDEPTNHLDMETIEALAKALNKFKGGVVLVSHDERLIRMVCKELWVCEAGRVHR 688

  Fly   584 WKGGILDYKDHLKNKITSE 602
            ..||..:|:|.|:.:...|
Zfish   689 IDGGFDEYRDILQEQFRKE 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 234/530 (44%)
ABCF_EF-3 74..292 CDD:213188 103/222 (46%)
ABC_tran_Xtn 286..373 CDD:289608 31/86 (36%)
ABCF_EF-3 386..578 CDD:213188 91/191 (48%)
abcf3XP_017206710.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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