DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9281 and abcf3

DIOPT Version :9

Sequence 1:NP_001285284.1 Gene:CG9281 / 32508 FlyBaseID:FBgn0030672 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001120542.1 Gene:abcf3 / 100145696 XenbaseID:XB-GENE-6087270 Length:711 Species:Xenopus tropicalis


Alignment Length:614 Identity:250/614 - (40%)
Similarity:375/614 - (61%) Gaps:37/614 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NKKIQQIPSTKK--ANGVPERELTEEEKLCAKL--EEEARISAEARSCTGSLAVHP--------- 69
            ::|||.:...||  ::.|..:.|   ||..|||  ::|.|...:.:..||::.:..         
 Frog   103 DEKIQNVMLLKKDQSSTVDVKRL---EKAEAKLKSKQEKRSERDLQKSTGNVVMEEASASQAASK 164

  Fly    70 -----------RSRDVKIANFSITFFGSELLQDTMLELNCGRRYGLIGLNGCGKSSLLAVLGGRE 123
                       :|.|::|.||.::|....||....|.|..||||||:|.||.||::||.:|.||.
 Frog   165 KENRIESSGKNKSYDIRIENFDVSFGERVLLTGAELHLATGRRYGLVGRNGLGKTTLLKMLAGRS 229

  Fly   124 VPVPPHIDIFHLTREIPASSKSALQCVMEVDEERIKL----EKLAEELAMSEEDDAQE-QLIDIY 183
            :.||.||.|.|:.:|:......|||.|:|.|..|.:|    ::|..:::....|.::. :|.:||
 Frog   230 LRVPSHISILHVEQEVAGDETPALQSVLECDTLRERLLQEEKELNTKISAGRGDGSESLRLSEIY 294

  Fly   184 ERLDDMSADLAEVKAARILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNH 248
            .:|:::.||.|..:|:.||.||||..:|||:..|:||||||||:|||||||.:|.|||||||||.
 Frog   295 SKLEEIEADKAPARASVILAGLGFKHSMQQQMTKEFSGGWRMRLALARALFARPDLLLLDEPTNM 359

  Fly   249 LDLDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNYEAFVRTRMELLEN 313
            ||:.|.:|||..|:|:...::::||.::|||.|.|:|:||..:||:.|.||:|:|::|:.|.|:|
 Frog   360 LDVRAILWLECYLQTWPSTILVVSHDRNFLNAVATDIVHLHSQRLEAYRGNFESFLKTKEERLKN 424

  Fly   314 QMKQYNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVSDDKVLNFYFPSC 378
            |.::|..:|....|::.:|.||.: :|..|.|.|||.|.|.|:......||  |.:|:..:....
 Frog   425 QQREYEAQQQYREHIQVFIDRFRY-NANRASQVQSKLKLLEKLPELKPVEK--DTEVILRFPDGF 486

  Fly   379 GKVPPPVIMVQNVNFRYNDETPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGM 443
            .|..||::.:..:.|.|:.:.| ::|||....|||:|:.:||.|||||||:||||.|:|.|..|:
 Frog   487 EKFSPPILQLDEIGFWYSSDQP-VFKNLSVSADLDSRICVVGENGAGKSTMLKLLMGELSPVQGI 550

  Fly   444 IRKNSHLRIARYHQHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQVCPIRQLS 508
            ...:.:|:|..:.||..:.|||:.|.:|.:.:.|.. |.:||.|..:|.||::|...|.|:..||
 Frog   551 RNAHRNLKIGYFSQHHVDQLDLNISAVELLAKRFSG-KTEEEYRHQLGSYGISGELAVRPVASLS 614

  Fly   509 DGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEI 573
            .||:.||.||.:....|:..:|||||||||||||:||..|:|.|.||::|||||.|.|..|.:|:
 Frog   615 GGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNKFKGGVILVSHDERFIRLVCQEL 679

  Fly   574 WVCEKETVTKWKGGILDYKDHLKNKITSE 602
            ||||...||:.:||..:|::.|:.:...|
 Frog   680 WVCENGGVTRIEGGFDEYRNILQEQFRRE 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9281NP_001285284.1 Uup 71..597 CDD:223562 233/530 (44%)
ABCF_EF-3 74..292 CDD:213188 102/222 (46%)
ABC_tran_Xtn 286..373 CDD:289608 33/86 (38%)
ABCF_EF-3 386..578 CDD:213188 88/191 (46%)
abcf3NP_001120542.1 PLN03073 1..702 CDD:215558 248/606 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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