DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9240 and mmp2

DIOPT Version :10

Sequence 1:NP_573054.2 Gene:CG9240 / 32505 FlyBaseID:FBgn0030669 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_596133.1 Gene:mmp2 / 2540235 PomBaseID:SPBC336.13C Length:180 Species:Schizosaccharomyces pombe


Alignment Length:132 Identity:45/132 - (34%)
Similarity:72/132 - (54%) Gaps:19/132 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KGPSMEPTLHSD-NVLLTER--LSKHWRTYQPGDIVIAISPIKADQFICKRIVAVSGDQVLIQKP 96
            :|.||:|..:.: |:|..:|  |.|..:.|:.||:||..||...::.:.||::.|..|.:..:.|
pombe    43 EGRSMKPAFNPETNMLQRDRVLLWKWNKDYKRGDVVILRSPENPEELLVKRVLGVEYDIMKTRPP 107

  Fly    97 IPIEAEFSGNSDDKKKPVMVKDYVPRGHVWIEGDNKGNSSDSRYYGPIPVGLIRSRVLCRIWPIS 161
                          ||..:|.  ||.||||:|||.:.:|.||..:||:..|||.::|:..::|.|
pombe   108 --------------KKLSLVP--VPEGHVWVEGDEQFHSIDSNKFGPVSTGLITAKVIAILFPFS 156

  Fly   162 EA 163
            .|
pombe   157 RA 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9240NP_573054.2 sigpep_I_bact 30..159 CDD:274044 42/126 (33%)
mmp2NP_596133.1 S26_SPase_I 38..148 CDD:119398 41/120 (34%)

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