DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8117 and polr3k

DIOPT Version :10

Sequence 1:NP_573049.2 Gene:CG8117 / 32499 FlyBaseID:FBgn0030663 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001002553.1 Gene:polr3k / 436826 ZFINID:ZDB-GENE-040718-291 Length:108 Species:Danio rerio


Alignment Length:70 Identity:22/70 - (31%)
Similarity:33/70 - (47%) Gaps:4/70 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DDMKQMRQKYVQDSI-NAAQMAKVQGTKTDQFKCERCDKRNCSQLHIRDGDEPIITFVIC--DEC 156
            ::.|..:.|.|.|.: .:|....|..|.....|||. .:....|:..|..|||:.||..|  .:|
Zfish    39 NNRKYPKLKEVDDVLGGSAAWENVDSTAEPCPKCEH-PRAYFMQIQTRSADEPMTTFYKCCNIQC 102

  Fly   157 GNRWK 161
            |:||:
Zfish   103 GHRWR 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8117NP_573049.2 TFSII <4..161 CDD:273592 21/68 (31%)
polr3kNP_001002553.1 RPB9 4..107 CDD:441202 21/68 (31%)
Zn-ribbon_RPC11 61..108 CDD:259794 17/48 (35%)

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