DRSC/TRiP Functional Genomics Resources

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Protein Alignment sog and vwc2

DIOPT Version :10

Sequence 1:NP_476736.1 Gene:sog / 32498 FlyBaseID:FBgn0003463 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_002933463.2 Gene:vwc2 / 100492716 XenbaseID:XB-GENE-852836 Length:325 Species:Xenopus tropicalis


Alignment Length:236 Identity:51/236 - (21%)
Similarity:78/236 - (33%) Gaps:81/236 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 SGRFYNESEQWRSAQDSCQMCACLRGQSSCEVIKCPAL--KCKSTEQLLQRD-GECCPSCVPKKE 808
            ||..|...|::.....:|. |.|......|...:||.|  :|      :|.| .:|||.|..:|.
 Frog   159 SGFVYAIGEKFSPGPSTCP-CLCTEEGPLCIQPECPKLHPRC------IQVDTSQCCPQCKERKN 216

  Fly   809 AADYSAQSSPATNATDLLQQRRGCRLGEQFHPAGASWHPFLPPNGFDTCTTCSCDPLTLEIRCPR 873
            ..|:..::..:.               |:|         .:.|     |..|.|| ...|:.|..
 Frog   217 YCDFRGKTYQSL---------------EEF---------MVSP-----CEKCRCD-ANGEVMCTV 251

  Fly   874 LVCPPLQCSEKLAYRPDKKACCKICPEGKQSSSNGHKTTPNNPNVLQDQAMQRSPSHSAEEVLAN 938
            ..||..:|.:.: |.|::  ||.||..|                          |:..||.::..
 Frog   252 SACPQTECVDPV-YEPEQ--CCPICKNG--------------------------PNCFAEAIVIP 287

  Fly   939 GG-------CKVVNKVYENGQEWHPILMSHGEQKCIKCRCK 972
            .|       |.:.:..||.| .|.    ...:..|.:..||
 Frog   288 AGREVKTDDCTICHCTYEEG-TWR----IERQALCTRHECK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sogNP_476736.1 VWC 102..174 CDD:278520
CHRD 200..334 CDD:214804
CHRD 341..467 CDD:214804
CHRD 473..585 CDD:214804
CHRD 594..708 CDD:214804
VWC 744..803 CDD:278520 17/58 (29%)
VWC 832..898 CDD:278520 16/65 (25%)
VWC 941..1017 CDD:278520 8/32 (25%)
vwc2XP_002933463.2 VWC 218..273 CDD:450195 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.

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