DRSC/TRiP Functional Genomics Resources

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Protein Alignment sog and crim1

DIOPT Version :10

Sequence 1:NP_476736.1 Gene:sog / 32498 FlyBaseID:FBgn0003463 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_002936419.1 Gene:crim1 / 100488895 XenbaseID:XB-GENE-481452 Length:1030 Species:Xenopus tropicalis


Alignment Length:249 Identity:62/249 - (24%)
Similarity:90/249 - (36%) Gaps:71/249 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   748 GRFYNESEQWRSAQDSCQMCACLRGQSSCEVIKCPALKCKSTEQLLQRDGECCPSC-----VPKK 807
            ||.:...|.|   .|.|:.|.|..|:..|.:|.||...|.|....   .|:|||||     ....
 Frog   606 GRRHENEESW---HDGCRECYCHNGKEMCGLITCPVPGCASPTIY---PGQCCPSCPDDSNARNP 664

  Fly   808 EAADYSAQSSPATNATDLLQQRRGCRLGEQFHPAGASWHPFLPPNGFDTCTTCSCDPLTLEIRCP 872
            |..|.|...:|                |.::...|.:|:       .||||.|:|.  :..:.|.
 Frog   665 ELTDPSICHAP----------------GGEYFVEGETWN-------IDTCTQCTCH--SGRVLCE 704

  Fly   873 RLVCPPLQCSEKLAYRPDKKACCKICPEGKQSSSNGHKTTPNNPNVLQDQAMQRSPSHSAEEVLA 937
            ..|||||.|.....   .:.:||..||:.....|     .|:|.::         ||:       
 Frog   705 TEVCPPLLCQNPTR---TQDSCCPQCPDDSLQPS-----VPSNESI---------PSY------- 745

  Fly   938 NGGCK-VVNKVYENGQEWHPILMSHGEQKCIKCRCKDSKVNCDRKRCSRSTCQQ 990
               || ....::...:.|.|       ..|..|.|.|..::|..:.|...||::
 Frog   746 ---CKNDEGDIFLAAESWKP-------NVCTSCVCMDGIISCYSESCPPVTCER 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sogNP_476736.1 VWC 102..174 CDD:278520
CHRD 200..334 CDD:214804
CHRD 341..467 CDD:214804
CHRD 473..585 CDD:214804
CHRD 594..708 CDD:214804
VWC 744..803 CDD:278520 19/54 (35%)
VWC 832..898 CDD:278520 18/65 (28%)
VWC 941..1017 CDD:278520 12/51 (24%)
crim1XP_002936419.1 IGFBP 32..83 CDD:459717
VWC 329..383 CDD:214564
VWC 396..449 CDD:214564
Antistasin 532..557 CDD:460713
Antistasin 560..585 CDD:460713
VWC 605..655 CDD:450195 19/54 (35%)
VWC 676..727 CDD:450195 18/62 (29%)
VWC 751..801 CDD:450195 10/46 (22%)
VWC 812..866 CDD:450195
CRIM1_C 900..1030 CDD:437274
Blue background indicates that the domain is not in the aligned region.

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