DRSC/TRiP Functional Genomics Resources

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Protein Alignment sog and fras1

DIOPT Version :10

Sequence 1:NP_476736.1 Gene:sog / 32498 FlyBaseID:FBgn0003463 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_002935497.2 Gene:fras1 / 100487299 XenbaseID:XB-GENE-478807 Length:4014 Species:Xenopus tropicalis


Alignment Length:326 Identity:69/326 - (21%)
Similarity:100/326 - (30%) Gaps:110/326 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   714 PGHCFPVYTDNNVPVPGDHNDNHLVNGETKCFHSGRFYNESEQWRSAQDSCQMCACLRGQSSCEV 778
            ||.|.||......|                |...|....:.|:|:.:.  |..|:|..|...|..
 Frog   154 PGECCPVCVGTGEP----------------CSLDGSMVLDGEEWKLSH--CSRCSCRNGVIQCLT 200

  Fly   779 IKCPALKCKSTEQLLQRDGECCPSCVPKKEAADYSAQSSPATNATDLLQQRRGCRLGEQFHPAGA 843
            ..|....|:..|.|....|:|||.|:||                        .|.:||:.:..|.
 Frog   201 ADCLPKVCRKDETLAIVPGKCCPECLPK------------------------SCHVGEKTYEHGV 241

  Fly   844 SWHPFLPPNGFDTCTTCSCDPLTLEIRCPRLVCPPLQCSE-KLAYRPDKKACCKICPEGKQSSSN 907
            .|...|       ||||.||...  :.|....|.|:.|.: :...:.|.| ||:.|         
 Frog   242 QWKRNL-------CTTCICDKGI--VNCHTKTCYPVTCDKGQTKIKRDGK-CCEQC--------- 287

  Fly   908 GHKTTPNNPNVLQDQAMQRSPSHSAEEVLANGGCKVVNKVYENGQEWHPILMSHGEQKCIKCRCK 972
                                       |.:.|.|.....|..:|..|:       ...|..|.|.
 Frog   288 ---------------------------VPSKGSCLYEGSVRYHGDLWN-------GSSCNFCLCD 318

  Fly   973 DSKVNCDRKRCSRSTCQQQTRVTSKRRLFEKPDAAAPAIDECCSTQCRRSRRHHKRQPHHQQRSS 1037
            ..||:|.:.:|::..|....::..              :|..|..:|..|..:...:.|..|.|.
 Frog   319 QGKVSCHKAQCAKVECSWGEKLVH--------------LDGKCCPECMPSTSYCIYEDHGNQDSD 369

  Fly  1038 S 1038
            |
 Frog   370 S 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sogNP_476736.1 VWC 102..174 CDD:278520
CHRD 200..334 CDD:214804
CHRD 341..467 CDD:214804
CHRD 473..585 CDD:214804
CHRD 594..708 CDD:214804
VWC 744..803 CDD:278520 17/58 (29%)
VWC 832..898 CDD:278520 20/66 (30%)
VWC 941..1017 CDD:278520 14/75 (19%)
fras1XP_002935497.2 VWC 37..96 CDD:278520
VWC 104..161 CDD:278520 4/6 (67%)
VWC 168..225 CDD:278520 17/58 (29%)
VWC 230..287 CDD:278520 20/66 (30%)
VWC 294..351 CDD:450195 14/77 (18%)
VWC 380..426 CDD:214564
VSP 406..789 CDD:146106
VSP 649..1031 CDD:146106
FU 1011..1057 CDD:238021
Cadherin_3 1105..1206 CDD:465048
Cadherin_3 1210..1315 CDD:465048
Cadherin_3 1317..1443 CDD:465048
Cadherin_3 1450..1578 CDD:465048
Cadherin_3 1585..1695 CDD:465048
Cadherin_3 1702..1814 CDD:465048
Cadherin_3 1821..1942 CDD:465048
Cadherin_3 1945..2063 CDD:465048
Cadherin_3 2071..2182 CDD:465048
Cadherin_3 2189..2297 CDD:465048
Cadherin_3 2301..2410 CDD:465048
Cadherin_3 2429..2541 CDD:465048
caca <2557..>2807 CDD:273296
Calx-beta 2557..2654 CDD:397326
caca <2800..>3051 CDD:273296
Calx-beta 3043..3137 CDD:413355
Blue background indicates that the domain is not in the aligned region.

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