DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Chsy and csgalnact2

DIOPT Version :10

Sequence 1:NP_996440.2 Gene:Chsy / 32497 FlyBaseID:FBgn0030662 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001119869.1 Gene:csgalnact2 / 560826 ZFINID:ZDB-GENE-030131-5186 Length:540 Species:Danio rerio


Alignment Length:580 Identity:132/580 - (22%)
Similarity:234/580 - (40%) Gaps:145/580 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 YVQGL----------KAEEMRQESLLLHRDIKRMAKYLEVPDESTYMLPSVSPESDSTKRHFQDH 354
            |.|.|          :|..::::...|.::::.|::.|.|..|..   ....|:|.:..|..:..
Zfish    56 YYQALLQEQEERHLSRAASLKRQIAQLKQELQEMSEKLRVLQEKK---EGPGPQSLNDGRDQEPG 117

  Fly   355 NILG-ISPELNK--------------FVPASTDDLLDWSFIARSLYSASSANPKQKIDSAMREGL 404
            ::|. :..:::|              .||..       ||....:|.......:...:..:|:..
Zfish   118 DLLEYLHSQIDKAEVNTGARLPSEYALVPFE-------SFTTTKVYQLEMGLTRHPEEKPVRKDR 175

  Fly   405 EDAITEVMENINNYSRQRGRVIEFRELLYGYHRLDALHGQDMILDLLLIYKKYRGKKMTVPVRRH 469
            .|.:.||:|        .|                        ||::...::..|::..:|::|.
Zfish   176 RDELVEVIE--------AG------------------------LDIINNPEEDDGQEDNIPMQRQ 208

  Fly   470 LYVQ-RAFTGIFVKEVDEDFYNVTLQQSLLGSLFQNGMARLSSH------FTMPSGLLSPTQDKI 527
            .:.: :.|.|::..|.|:            |:|::...|:.:||      ...|.|.|...:...
Zfish   209 TFTESQFFEGLYRTERDK------------GTLYELYFAKENSHEYRHVTLFRPFGPLMKVRSTS 261

  Fly   528 V--------FVLPIAGRLGTFERFLRTYERVCVRGEQHCDLLVVIFGSPDELGDHLQLLHDLHAR 584
            |        .::|::||...|.:||..:..||::.::...|.||.||... |.|..:.|..:.:.
Zfish   262 VDTASAIINIIVPLSGRTEAFVQFLHNFREVCIQQDKRVHLTVVYFGQAG-LQDVKESLKKMASE 325

  Fly   585 HVYQQVNWIQRSSAFSRGVALDVAARSSYIRQEDIILFI-DVDMVFEVETLQRVRMHTQRGKQVY 648
            ..:.....|.....||||..||:.|. ::.:..|:::|. |||:.|.:|.|...|::|..||:|:
Zfish   326 ESFSNYTLIPVDEEFSRGRGLDIGAH-AWEKGGDVLMFFCDVDIYFTLEFLSTCRLNTAPGKRVF 389

  Fly   649 LPIVFSQYDPQRRSGDAGGSEDEGETPRIDD------ERGYFRQFGFGICAIYKSDILDEDINGF 707
            .|:|||.|:|....|:.      ...|.|:.      :.|::|.||||:...|:||.|  :|.||
Zfish   390 YPVVFSLYNPAIVYGNL------EFPPPIESQLIHKKDAGFWRDFGFGMTCQYRSDFL--NIGGF 446

  Fly   708 DKDITGWGLEDVKFLEKIVRVGTRQRGFLANTAELAMDYNEAAEQWRRLSVFRAPDPTLVHIYHD 772
            |.::.|||:|||....|.:|...                          .|.|.|...|.|::|:
Zfish   447 DLEVKGWGVEDVHLYRKYLRSDP--------------------------IVIRTPVSGLFHLWHE 485

  Fly   773 ISCDVQLDAPQYNMCLGTKANSLGSTRLMEQLFHSSPENVQFAADFNRQKQQQQQQQQAR 832
            ..|..:|...||.||:.:||        |.:..||....:.|..:.....::|..:.|:|
Zfish   486 KLCADELTPEQYRMCIQSKA--------MNEASHSHLGMLVFREEIETHLRKQAYKTQSR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChsyNP_996440.2 Galactosyl_T 71..>251 CDD:473923
CHGN 221..801 CDD:461712 125/547 (23%)
csgalnact2NP_001119869.1 CHGN 66..514 CDD:461712 125/545 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.