DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9220 and csgalnact1

DIOPT Version :9

Sequence 1:	NP_001285280.1	Gene:	CG9220 / 32497	FlyBaseID:	FBgn0030662	Length:	832	Species:	Drosophila melanogaster
Sequence 2:	XP_002934039.1	Gene:	csgalnact1 / 100497098	XenbaseID:	XB-GENE-976931	Length:	529	Species:	Xenopus tropicalis

Alignment Length:	616	Identity:	151/616 - (24%)
Similarity:	256/616 - (41%)	Gaps:	159/616 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   248 IPCTWNYEMQY--ILRHNS-SGRNAYTGKL-KRKEIHNAITLHPIKQAPLMYRLHSYVQGLKAEE 308
            :.||...|.:.  :.|.|| :|:..|...| :|:|.|                 .:|:..||
Frog    30 LACTPRSEDEQLSLTRANSPTGKEGYHAVLQEREEEH-----------------RNYITSLK--- 74

  Fly   309 MRQESLLLHRDIKRMAKYLEVPDESTYMLPSV-SPESDSTKRHFQDHNILGISPELNKFVPASTD 372
                        |::|:..:...:.:..|.:| .|.||:....| ||.    |||      .:.:
Frog    75 ------------KQIAQLKDELQQRSEQLKTVQGPYSDTVGVAF-DHG----SPE------KAQN 116

  Fly   373 DLLDW--------------------------SFIARSLYSASSA---NPKQK-IDSAMREGLEDA 407
            ||:|:                          ||..:.:|...:.   :|::| :....|:.|.:.
Frog   117 DLIDFLHSQVNKAEVHNGVKVPTEYAAIPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAET 181

  Fly   408 ITEVMENINNYSRQRGRVIEFRELLYGYHRLDALHGQDMILDLLLIYKKYRGKKMTVPVRRHLYV 472
            :...::.:|  |.:.|. |..|::   |...|.:.|         ||:..:.|..       ||
Frog   182 VDVALDALN--SPEEGG-ISHRKV---YTSADFIEG---------IYRTEKDKGT-------LY- 223

  Fly   473 QRAFTGIFVKEVDEDFYNVTLQQSLLGSLFQNGMARLSSHFTMPSGLLSPTQDKIVFVLPIAGRL 537
            :.:|.|    |..::|..:.|.:. .|.:.:....||:    |.:.:::       .::|:|.|.
Frog   224 ELSFKG----EKSQEFKRLVLFRP-FGPIMKVKNERLN----MANVIVN-------IIVPLAKRA 272

  Fly   538 GTFERFLRTYERVCVRGEQHCDLLVVIFGSPDELGDHLQLLHDLHARHVYQQVNWIQRSSAFSRG 602
            ..|::|::.:..||:..:....|.||.||. ::..:...:|.:......::...:||.:..||||
Frog   273 DKFQQFMQNFREVCIHQDGRIHLTVVYFGK-EQAHEVRSILENTSKAANFKNFTFIQLNEEFSRG 336

  Fly   603 VALDVAARSSYIRQEDIILFIDVDMVFEVETLQRVRMHTQRGKQVYLPIVFSQYDPQRRSG--DA 665
            ..|||.|| ::.....::.|.|||:.|..|.|...|::||.||:|:.|::||||:|....|  ||
Frog   337 KGLDVGAR-AWKGSNVLLFFCDVDIYFTAEFLNSCRINTQPGKRVFYPVLFSQYNPSIIYGHHDA 400

  Fly   666 GGSEDEGETPRIDDERGYFRQFGFGICAIYKSDILDEDINGFDKDITGWGLEDVKFLEKIVRVGT 730
            ..|.|:...  |..:.|::|.||||:...|:||.:  :|.|||.||.|||.|||....|.:.
Frog   401 IPSIDQQLV--IKKDTGFWRDFGFGMTCQYRSDFI--NIGGFDIDIKGWGGEDVHLYRKYLH--- 458

  Fly   731 RQRGFLANTAELAMDYNEAAEQWRRLSVFRAPDPTLVHIYHDISCDVQLDAPQYNMCLGTKANSL 795
                                   ..|.|.|.|...|||::|:..|..:|...||.||:.:||
Frog   459 -----------------------SNLIVIRTPVKGLVHLWHEKRCMDELAPEQYKMCMQSKA--- 497

  Fly   796 GSTRLMEQLFHSSPENVQFAADFNRQKQQQQ 826
                 |.:..|.....:.|..:.....::|:
Frog   498 -----MNEASHGQLGMLVFRHEIEAHLRKQR 523

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9220	NP_001285280.1	Galactosyl_T	71..>251	CDD:304462	0/2 (0%)
CG9220	NP_001285280.1	CHGN	221..799	CDD:283361	147/587 (25%)
csgalnact1	XP_002934039.1	Glyco_tranf_GTA_type	68..506	CDD:416254	137/542 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910