DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp11 and Alp12

DIOPT Version :9

Sequence 1:NP_573047.1 Gene:Alp11 / 32496 FlyBaseID:FBgn0030661 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001188848.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster


Alignment Length:537 Identity:182/537 - (33%)
Similarity:269/537 - (50%) Gaps:95/537 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RLAILFLLHALIPILALSVPMV------------EQVQ--PAD-ELLSSHWLRQAQSQLRERLAR 56
            ||.::.::.:.:.|.|:.:..|            |.|.  |.| ......|..|...:|::.::|
  Fly    62 RLFLISVVFSALLITAMCIGFVVHYGMSGDVGDMETVSYWPVDLPKEQKEWYDQGIDELQKAVSR 126

  Fly    57 TKDSIADVRQAKNVVMLLGDGLSITTLTAARILKGQRRGGRGEDAQLAVEQFPFSGLSKTYCIDE 121
            ..:.    |:||||::.:|||:...|:||||||      |..|:..|..||||..||.||||.|:
  Fly   127 QFNR----RRAKNVILFVGDGMGPNTVTAARIL------GVKEEGLLRWEQFPDMGLLKTYCADK 181

  Fly   122 QTPDSACTATAYFGGVKTHSGTVGQSGS------------GERVDSVLQWAQRAGKATGVVTTTR 174
            |.|||..||||.|||||.:..|.|...:            ...|.::|:|||..|..||.|||||
  Fly   182 QVPDSFSTATALFGGVKVNYETGGVDANVPLGNCSASLKEDHHVQTILKWAQVDGMRTGFVTTTR 246

  Fly   175 LTDASPAGAYAHVSRRGEE--------------LEIARQLVEEEPGRNLNVILGGG--------- 216
            :|.|:||..||||..|..|              ::|||||:|:..|:::|||:|||         
  Fly   247 VTHATPAALYAHVPDRRWECESGMPAEAQGQGCMDIARQLIEQPTGQSINVIMGGGRQMLVSDVT 311

  Fly   217 ------LGKFADERRDGKDLLAQWRESNPNGCFSRSL----KELRNCT-DATGTLLGIFSDSHMS 270
                  |..:|.:.:||:||:..||....:...|.::    :||.|.. .....:||||::.|:.
  Fly   312 GSAADPLDTWAGQSKDGRDLIRDWRLKKADEGVSHAVVQNNRELWNLNGQDVDYVLGIFANGHLM 376

  Fly   271 YHLAASKE---LPRLCDMAAAAIEKLERKSQEDGN---GYFVFIEGGRIDHGHHETRVGYALDEM 329
            |.....:.   :|.|.:|...|:|.|       ||   |:.:.:|.|.||..||......||.|:
  Fly   377 YDHERDRSDAGMPSLSNMTLKALEVL-------GNSDKGFLLVVEAGLIDQAHHRGNARKALSEV 434

  Fly   330 VEFDAAVETVIQMTDPRD----TLVVVTADHSHTLSMSGYAKRGTPILGMDAQQRDVNGVPYSTL 390
            :|.:||||:.:......|    |||:|||||||:|:::|:..||:.|||: |......|.||:||
  Fly   435 LELNAAVESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDRGSSILGL-AGNSKTEGTPYTTL 498

  Fly   391 NYAIGKWQSLDKD----GRRESPSKTLSPTSYT-PSYIHGRKGVHSGEDVVVFAMGPQSHLFGGV 450
            .|.. .:|....|    .|::..:..::...|| .:.|:..:.:|.|.||.:.|.|..|:||.||
  Fly   499 TYGT-SYQGFQVDPQTQSRKDPTADDITAWEYTQQAAINTDENLHGGSDVTIHADGAMSYLFHGV 562

  Fly   451 MEQNLLPHIMGYAACLG 467
            .||:.:.|.:.||..:|
  Fly   563 HEQSYVAHAISYALRIG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp11NP_573047.1 ALP_like 68..467 CDD:304875 166/459 (36%)
Alp12NP_001188848.1 ALP_like 134..579 CDD:304875 166/459 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466669
Domainoid 1 1.000 141 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
1110.910

Return to query results.
Submit another query.