DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and Zscan4b

DIOPT Version :9

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001172102.1 Gene:Zscan4b / 665780 MGIID:3645447 Length:505 Species:Mus musculus


Alignment Length:343 Identity:83/343 - (24%)
Similarity:127/343 - (37%) Gaps:100/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RSASRSTSTSAVFAAAAAAPPAPMLVDKQQEQLKLDLEQAHVRLPATLKIRRLNVEPCSSSSVSG 157
            |.||:.||:..|...:|..|     .|...|:..:||.:.::           :.:..:..:.|.
Mouse   235 RRASQDTSSHHVDFPSALTP-----ADVPMEEQPMDLSRENI-----------SEDKNNCYNTSR 283

  Fly   158 TITTSTEPSEDVKEEKTDSLSL-------------IPDGAMVLSLNDFQA-----QDSITQQAEE 204
            ...|.....:::...|||||.:             ||.|....|....|.     |:|:.:...|
Mouse   284 NAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSE 348

  Fly   205 KDPKKQQDEDEGQAKMLELDPWDDENTPEHLYEIETPLI---EESVVASPPLPLPPTHPANQQKK 266
            |||:                              |.|.:   :|..::.|  .|...|.||    
Mouse   349 KDPR------------------------------EVPGLQSRQEQPISDP--VLGKNHEAN---- 377

  Fly   267 RTYRRVSPNVKHEKLTANVDDDFKAGSTTKRRNCERSPKI--CDVCGNTYKYQHALNAHMRRH-N 328
                  .|...|:|                  ...|..|:  |:.|...:|:..:|::|.|.| |
Mouse   378 ------LPCESHQK------------------RFHRDAKLYKCEECSRMFKHARSLSSHQRTHLN 418

  Fly   329 NERPYSCEVCQKAFISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEV 393
            .:....|..|||.|....:||.|..:|..:||:.|..||:.||...:.|.||.|||||.||||.:
Mouse   419 KKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSL 483

  Fly   394 CNKGFAYAHVLSAHRRTH 411
            |::.|..:.....|.|.:
Mouse   484 CSRRFRQSSTYHRHLRNY 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:285071
DUF2117 165..>273 CDD:303038 24/128 (19%)
COG5048 <303..439 CDD:227381 41/112 (37%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
zf-H2C2_2 319..344 CDD:290200 10/25 (40%)
zf-C2H2 333..355 CDD:278523 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
zf-H2C2_2 347..371 CDD:290200 9/23 (39%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-H2C2_2 375..400 CDD:290200 14/24 (58%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
zf-H2C2_2 404..427 CDD:290200 2/8 (25%)
C2H2 Zn finger 419..439 CDD:275368
Zscan4bNP_001172102.1 SCAN <51..117 CDD:295388
zf-C2H2 394..416 CDD:278523 6/21 (29%)
C2H2 Zn finger 396..416 CDD:275368 6/19 (32%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:290200 10/24 (42%)
zf-CHCC <441..489 CDD:295045 22/47 (47%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..499 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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