DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9215 and Vom1r42

DIOPT Version :9

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_017445028.1 Gene:Vom1r42 / 494303 RGDID:1549734 Length:306 Species:Rattus norvegicus


Alignment Length:152 Identity:30/152 - (19%)
Similarity:58/152 - (38%) Gaps:50/152 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DLGVACLVCLAEEPEASSIYGHDPESPHMLILDKIRCCTSLQLDSSPSQLQRWPDKICK----QC 71
            |:|...::.::......|:|.       |.:|:   |..::.:..|.|:..:...:..|    .|
  Rat    80 DIGCKLIMYISRITRGVSLYA-------MCLLN---CFQAIIISISNSRWMKLKYRATKYIGPSC 134

  Fly    72 ------HLELSV---------SYR-------FHEKCTAVQKLFRSASRST-------STSAVFAA 107
                  ||.|::         ||:       .:|.|:    ||.|:|.:|       |.|.|...
  Rat   135 SVSWLVHLVLNIIIPARMLGPSYKKNATNWVSYEYCS----LFPSSSMTTVLYMFLLSFSDVLCL 195

  Fly   108 AAAAPPAPMLVD---KQQEQLK 126
            :..|..:..:::   |.:.|:|
  Rat   196 SLMACASVSMINILYKHKRQVK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:285071 16/101 (16%)
DUF2117 165..>273 CDD:303038
COG5048 <303..439 CDD:227381
C2H2 Zn finger 307..327 CDD:275368
zf-H2C2_2 319..344 CDD:290200
zf-C2H2 333..355 CDD:278523
C2H2 Zn finger 335..355 CDD:275368
zf-H2C2_2 347..371 CDD:290200
C2H2 Zn finger 363..383 CDD:275368
zf-H2C2_2 375..400 CDD:290200
C2H2 Zn finger 391..411 CDD:275368
zf-H2C2_2 404..427 CDD:290200
C2H2 Zn finger 419..439 CDD:275368
Vom1r42XP_017445028.1 7tm_GPCRs 10..299 CDD:421689 30/152 (20%)
TM helix 1 10..34 CDD:410628
TM helix 2 46..68 CDD:410628
TM helix 3 84..106 CDD:410628 4/31 (13%)
TM helix 4 132..148 CDD:410628 4/15 (27%)
TM helix 5 183..206 CDD:410628 4/22 (18%)
TM helix 6 232..257 CDD:410628
TM helix 7 267..293 CDD:410628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.