DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and Zfp560

DIOPT Version :10

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001004190.2 Gene:Zfp560 / 434377 MGIID:1915280 Length:754 Species:Mus musculus


Alignment Length:218 Identity:78/218 - (35%)
Similarity:108/218 - (49%) Gaps:11/218 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 RRNCERSPKICDVCGNTYKYQHALNAHMRRHNNERPYSCEVCQKAFISNVELRRHMRVHTGQKPY 361
            |.:....|.:|..||..:.....|:.|:|.|..|:|:.||.|.|||.....|.:|:|.|||:|||
Mouse   523 RTHTGEKPYVCKECGKAFTVSSHLSKHVRIHTGEKPHKCEECGKAFTVRSGLTKHIRTHTGEKPY 587

  Fly   362 SCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFAYAHVLSAHRRTHTGKKQFQCTQCDKGF 426
            :|:.|.:.|:......:|:|.||||:||.|:.|.|.||.:..|.||.|.|||:|.|:|.:|.|.|
Mouse   588 NCKECGKAFTTSSGLLEHKRSHTGEKPYECDQCGKAFASSSYLIAHLRIHTGEKPFECNECGKAF 652

  Fly   427 TKKTYLSAHMEQHRGSGNGEASVASSS----ADASSRNQNASARKESARKQQQIPESFSLDSVEL 487
            |..:||..||..|.|....:......:    :..|...:..|..|....|...|  :|| .|...
Mouse   653 TCSSYLHIHMRTHTGEKPYDCKECGKTFAVYSHLSKHVRIHSGEKAYTCKSDGI--AFS-RSHRT 714

  Fly   488 EQTKVLEECIVANDFMFNEEDNA 510
            |..|.||    .|.|:...|:.|
Mouse   715 EHLKSLE----INSFVGGNEETA 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:462262
COG5048 <303..439 CDD:227381 59/135 (44%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
zf-H2C2_2 347..371 CDD:463886 11/23 (48%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
Zfp560NP_001004190.2 KRAB 41..97 CDD:214630
COG5048 276..689 CDD:227381 63/165 (38%)
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 309..329 CDD:275368
C2H2 Zn finger 337..357 CDD:275368
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..441 CDD:275368
C2H2 Zn finger 449..469 CDD:275368
C2H2 Zn finger 477..497 CDD:275368
C2H2 Zn finger 505..525 CDD:275368 1/1 (100%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
C2H2 Zn finger 561..581 CDD:275368 9/19 (47%)
C2H2 Zn finger 589..609 CDD:275368 5/19 (26%)
C2H2 Zn finger 617..637 CDD:275368 9/19 (47%)
C2H2 Zn finger 645..665 CDD:275368 9/19 (47%)
C2H2 Zn finger 673..693 CDD:275368 1/19 (5%)
C2H2 Zn finger 701..718 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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