DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and CG4854

DIOPT Version :10

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:442 Identity:120/442 - (27%)
Similarity:189/442 - (42%) Gaps:131/442 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNNLQPRVVDLGVACLVCLAEEPEASSIYGHDPESPHMLILDKIRCCTSLQLDSSPSQLQRWPD 65
            |..|:..|  ||  .|.:||. :|:..|:...:|:.|     |||:.||.::|..||.    ||:
  Fly     1 MHTNVDSR--DL--KCRICLV-QPKDESLMPTEPDFP-----DKIKRCTGVELSESPD----WPN 51

  Fly    66 KICKQCHLELSVSYRFHEKCTAVQKLFRSASRSTSTSAVFAAAAAAPPAPMLVDKQQEQLKLDLE 130
            :||..|.|.|..:.:....|                                     :|.:.||:
  Fly    52 RICTSCALLLRAALKLRSLC-------------------------------------QQTEKDLK 79

  Fly   131 QAHVRLPATLKIRRLNVEPCSSSSVSGTITTSTEPSEDVKEEKTDSLSLIPDGAMVLSLNDFQAQ 195
            :.        |::.:|:|.......:...|.|.:.|   |.|.|.|.|.:          :::..
  Fly    80 EQ--------KLQEINIEIVHDEQETKKKTESRDLS---KNEATGSDSEL----------EYEYL 123

  Fly   196 DS--ITQQAEEKDPKKQQDEDEGQAKMLELDPWDDENTPEHLYEIETPLIEESVVASPPLPLPPT 258
            ||  :|.::.| |.....||      ::.::|           .|..|  ||||.:..|.|    
  Fly   124 DSYDVTLESSE-DVACSADE------LVSIEP-----------AISAP--EESVYSLSPKP---- 164

  Fly   259 HPANQQKKRTYRRVSPNVKHEKLTANVDDDFKAGSTTKRRNCERSPKICDVCGNTYKYQHALNAH 323
                                  :|...:|..:|.|.|           |::|.|.|..:..|..|
  Fly   165 ----------------------VTFEDEDSGQAASFT-----------CNICNNVYSERVKLTNH 196

  Fly   324 MRRHNNERPYSCEVCQKAFISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERP 388
            |:.|:.::|:.||:|.|.|....:|.|||..|||.:||.|.:|:.||:|..:..||:||||.|||
  Fly   197 MKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERP 261

  Fly   389 YVCEVCNKGFAYAHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQHR 440
            |.||.|::.|.|::||..|.:||||::.|.|..|.|.|::..:.::|.:.|:
  Fly   262 YKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:462262 23/75 (31%)
COG5048 <303..439 CDD:227381 56/135 (41%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
zf-H2C2_2 347..371 CDD:463886 12/23 (52%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 19/54 (35%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 201..>258 CDD:227381 25/56 (45%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
zf-H2C2_2 221..244 CDD:463886 12/22 (55%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..271 CDD:463886 13/19 (68%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
C2H2 Zn finger 292..312 CDD:275368 5/19 (26%)

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