DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and ranshi

DIOPT Version :9

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:440 Identity:117/440 - (26%)
Similarity:179/440 - (40%) Gaps:121/440 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GVACLVC--LAEEPEASSIYGHDPESPHMLILDKIRCCTSLQLDSSPSQLQRWPDKICKQCHLEL 75
            |..|..|  ......:.:|:    |..:...|:.|:..|...|.:..:    .|:::|..|...|
  Fly     3 GKVCRTCGKRTNAERSLNIF----EKRNQTTLEHIKLLTGAVLKNCST----LPNRLCASCQTCL 59

  Fly    76 SVSYRFHEKCTAVQK-LFRSASRSTSTSAVFAAAAAAPPAPMLVDKQQEQLKLDLEQAHVRLPAT 139
            ..:..|.|:|..||: |..|.....     |.......|..:|   :||:|:|||.:..:.:.  
  Fly    60 QQAISFRERCLEVQRELLHSQDDED-----FLRICQESPKSVL---EQEELELDLAEISIEVE-- 114

  Fly   140 LKIRRLNVEPCSSSSVSGTITTSTEPSEDVKEEKTDSLSLIPDGAMVLSLNDFQAQDSITQ-QAE 203
             ::..||..|..||.                                     |:.:|.:.: :..
  Fly   115 -RLDDLNEGPIQSSG-------------------------------------FKVEDILNESKIN 141

  Fly   204 EKDPKKQQDEDEGQAKMLELDPWDDENTPEHLYEIETPLIEESVVASPPLPLPPTHPANQQKKRT 268
            |.:|..:.|.|..:...|             :||.:|.:                 .|.|:.|..
  Fly   142 EDEPNNEDDIDYSEMDYL-------------IYESDTEV-----------------DAKQELKSD 176

  Fly   269 YRRVSPNVKHEKLTANVDDDFKAGSTTKRRNCERSPK------ICDVCGNTYKYQHALNAHMRRH 327
                |.|.|                  |||| .|:|:      .|:.|||..|.:.:...|.:||
  Fly   177 ----SENPK------------------KRRN-RRNPRDSNRTFFCEECGNHIKDRISFILHCKRH 218

  Fly   328 NNERPYSCEVCQKAFISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCE 392
            ...:.:.||.|:..|.:..||:||:|.|||:||:.||||.|.|||:.:..||||.||.|||:||:
  Fly   219 RGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCK 283

  Fly   393 VCNKGFAYAHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQ--HR 440
            .||..|..:::|..|...|||:|.|:|..|||.|::.|:|:.|...  ||
  Fly   284 ECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:285071 17/78 (22%)
DUF2117 165..>273 CDD:303038 13/108 (12%)
COG5048 <303..439 CDD:227381 60/143 (42%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
zf-H2C2_2 319..344 CDD:290200 7/24 (29%)
zf-C2H2 333..355 CDD:278523 9/21 (43%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
zf-H2C2_2 347..371 CDD:290200 15/23 (65%)
C2H2 Zn finger 363..383 CDD:275368 12/19 (63%)
zf-H2C2_2 375..400 CDD:290200 14/24 (58%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 404..427 CDD:290200 11/22 (50%)
C2H2 Zn finger 419..439 CDD:275368 8/21 (38%)
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 17/79 (22%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 27/53 (51%)
C2H2 Zn finger 226..246 CDD:275368 9/19 (47%)
zf-H2C2_2 238..262 CDD:290200 15/23 (65%)
C2H2 Zn finger 254..274 CDD:275368 12/19 (63%)
zf-H2C2_2 269..291 CDD:290200 14/21 (67%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I4797
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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