DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and Meics

DIOPT Version :10

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:551 Identity:134/551 - (24%)
Similarity:208/551 - (37%) Gaps:130/551 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNNLQPRVVD--LGVACLVCLAEEPEASSIYG-------HDPESPHML--ILDKIRCCTSLQLDS 55
            |:....|.||  :|..|..|    .|.|||..       .||....||  ||.:|  |       
  Fly     5 SSGKMERSVDASMGKNCRAC----AEHSSILVDLFSKEISDPPIWEMLNSILPEI--C------- 56

  Fly    56 SPSQLQR--WPDKICKQCHLELSVSYRFHEKCTAVQKLFR-----SASRSTSTSAVFAAAAAAPP 113
               :::|  .|.|||..|.:....::.|..||....:.|.     ..|.|..:.:........|.
  Fly    57 ---RVKRDEMPQKICPTCLVAAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPL 118

  Fly   114 APMLVDKQQEQL-----KLDLEQAHVRLPATLKIRRLNVEPCSSSSVSGTITTSTEPSEDVKEEK 173
            .|..:...::.|     |||..:..|:....        ||....:.:|   ..:||.::|.|  
  Fly   119 IPFEIVGCEDPLDTNVTKLDANRPDVKTDID--------EPTDGKATNG---QESEPLQEVFE-- 170

  Fly   174 TDSLSLIPDGAMVLSLNDFQAQDSITQQAEEKDP-KKQQDEDEGQAKMLELDPWDDENTPEHLYE 237
                         :::||.:.:|.::.|...:|. .::.|.:...::..:.|.|...:|.:.   
  Fly   171 -------------ITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQ--- 219

  Fly   238 IETPLI-----EESVVASPPLPLPPTHPANQQKKRTYRRVSPNVKHEKLTANVDDDFKAGSTTKR 297
             :.|.|     .::|..:           ||....|...||.:.: :.|..:|....:.|.|.| 
  Fly   220 -DEPWIPGGGGRQTVGGN-----------NQSLLCTECGVSYSTQ-KALARHVAKHKEQGDTQK- 270

  Fly   298 RNCERSPKICDVCGNTYKYQHALNAHMRRHNNERPYSCEVCQKA--------------------- 341
                  |.:||.||..::....|..|.|||..|||:.|.:|.||                     
  Fly   271 ------PHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHK 329

  Fly   342 -------FISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFA 399
                   |.:...||.|::.|||::||.|..|.:.|:.....|.|.|:|..|||:.||:|.|||.
  Fly   330 CPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFV 394

  Fly   400 YAHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQHRGSGNGEASVASSSADASSRNQNAS 464
            ....|..|.|.|.|.:||:|..|||.|.:|:.:..|...|.|.   :.........|.|.|.:..
  Fly   395 QNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGI---KPFKCEECGQAFSHNHHLK 456

  Fly   465 AR-----KESARKQQQIPESFSLDSVELEQT 490
            :.     .|...|..|..:.||.:...::.|
  Fly   457 SHLRIHTGEKPYKCDQCGKGFSANQSLMKHT 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:462262 23/86 (27%)
COG5048 <303..439 CDD:227381 56/163 (34%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/47 (17%)
zf-H2C2_2 347..371 CDD:463886 10/23 (43%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 24/90 (27%)
C2H2 Zn finger 242..262 CDD:275368 5/20 (25%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 20/77 (26%)
COG5048 <299..486 CDD:227381 54/189 (29%)
C2H2 Zn finger 302..322 CDD:275368 4/19 (21%)
C2H2 Zn finger 330..350 CDD:275368 4/19 (21%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
COG5048 <395..583 CDD:227381 25/96 (26%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 3/19 (16%)
C2H2 Zn finger 470..486 CDD:275368 3/15 (20%)
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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