DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and Clamp

DIOPT Version :10

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster


Alignment Length:381 Identity:106/381 - (27%)
Similarity:167/381 - (43%) Gaps:58/381 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 TDSLSLIPDGAMVLSLNDFQAQ------DSITQQAEEKDPKKQQDEDEGQAKMLELDPWD----D 228
            :|:|..:....|....::.:|.      .|:.||::.|.||:.:.|...||:........    .
  Fly   197 SDTLEPVQQSVMQQQQHESKASKCINCGSSMLQQSKRKGPKQVRCESCMQAEQTAQQQQQLFVAQ 261

  Fly   229 ENTPEHLYEI--ETPLIE---ESVVASPPLPLPPT---------HPANQQKKRTYRRVSPNVK-- 277
            :....|..:|  .||..:   :.:||:......|.         ||.   |||..::::...|  
  Fly   262 DGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREASSGSGHHPV---KKRNSQQMTKCQKCN 323

  Fly   278 ---------HEKLT-ANVDDDFKAGSTTKRR--NCER--SPKICDVCGNTYKYQHALNAHMRRHN 328
                     |...: :.|....|...|.|..  :|..  .|..|::||..:....:|.:|.:.|:
  Fly   324 GSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWSHKKLHS 388

  Fly   329 NERPYSCEVCQKAFISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEV 393
            .|:.|.|.:|..||...|.|:.|.|:|||:|||.|:.|..:||.....|.|||.|:|||||||.|
  Fly   389 GEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQFSQSPHLKNHERTHSGERPYVCGV 453

  Fly   394 CNKGFAYAHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQHRGSGNGEASVASSS-ADAS 457
            |:||||....|..|||.|||:|.::|..|...|::..:|..|.:.|.|....:..:.|:: ||..
  Fly   454 CDKGFARHATLWNHRRIHTGEKPYKCEICGSAFSQAAHLKNHAKVHSGEKPYKCEICSAAFADRF 518

  Fly   458 SRNQNASARKESARKQQQIPESFSLDSVELEQTKVLEECIVANDFMFNEEDNAEQE 513
            :..::....::..   |..|...|.|.:           ||....:.:.||.|:||
  Fly   519 ALKRHRGIHQKYG---QTAPRQTSSDGM-----------IVHKQEIPDMEDEAQQE 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:462262
COG5048 <303..439 CDD:227381 58/135 (43%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
zf-H2C2_2 347..371 CDD:463886 11/23 (48%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
C2H2 Zn finger 391..411 CDD:275368 11/19 (58%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 58/138 (42%)
C2H2 Zn finger 367..387 CDD:275368 5/19 (26%)
C2H2 Zn finger 395..415 CDD:275368 8/19 (42%)
zf-H2C2_2 407..432 CDD:463886 12/24 (50%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
C2H2 Zn finger 451..471 CDD:275368 11/19 (58%)
COG5048 475..>529 CDD:227381 11/53 (21%)
C2H2 Zn finger 479..499 CDD:275368 5/19 (26%)
C2H2 Zn finger 507..527 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.

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