DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and GFI1

DIOPT Version :9

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001120687.1 Gene:GFI1 / 2672 HGNCID:4237 Length:422 Species:Homo sapiens


Alignment Length:146 Identity:56/146 - (38%)
Similarity:82/146 - (56%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 KRRNCERSPKICDVCGNTYKYQHALNAHMRRHNNERPYSCEVCQKAFISNVELRRHMRVHTGQKP 360
            :|.:....|..|::||.|:.:..:|..|...|:.||.:.|::|.|:|..:..|..|:.:|:..:|
Human   275 RRSHSGTRPFACEMCGKTFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRP 339

  Fly   361 YSCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFAYAHVLSAHRRTHTGKKQFQCTQCDKG 425
            |.|::|.:||......|||..|||||:|:.|:||.|.|:.:..|..|.|.|||.|.|.|..|.||
Human   340 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKG 404

  Fly   426 FTKKTYLSAHMEQHRG 441
            |.:|..|..|.|...|
Human   405 FQRKVDLRRHRETQHG 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:285071
DUF2117 165..>273 CDD:303038
COG5048 <303..439 CDD:227381 54/135 (40%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
zf-H2C2_2 319..344 CDD:290200 9/24 (38%)
zf-C2H2 333..355 CDD:278523 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
zf-H2C2_2 347..371 CDD:290200 8/23 (35%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-H2C2_2 375..400 CDD:290200 14/24 (58%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
zf-H2C2_2 404..427 CDD:290200 12/22 (55%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
GFI1NP_001120687.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109
SNAG domain. /evidence=ECO:0000250 1..20
Required for interaction with RELA. /evidence=ECO:0000269|PubMed:20547752 140..257
COG5048 <254..416 CDD:227381 54/140 (39%)
C2H2 Zn finger 257..278 CDD:275368 1/2 (50%)
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
C2H2 Zn finger 342..362 CDD:275368 7/19 (37%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
C2H2 Zn finger 398..417 CDD:275368 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24404
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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