DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and Zscan4c

DIOPT Version :9

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001013787.1 Gene:Zscan4c / 245109 MGIID:2685243 Length:506 Species:Mus musculus


Alignment Length:388 Identity:93/388 - (23%)
Similarity:141/388 - (36%) Gaps:111/388 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CTSLQLDSSPSQLQRWPDKICKQCHLELSVSYRFHEKCTAVQKL---FRSASRSTSTSAVFAAAA 109
            |:..::||...        |.|:.|.|       ||:...|.:.   .|.||:.|.:..|     
Mouse   202 CSGNEMDSLLI--------IQKEQHPE-------HEEGNVVCQFPHGARRASQGTPSHHV----- 246

  Fly   110 AAPPAPMLVDKQQEQLKLDLEQAHVRLPATLKIRRLNVEPCSSSSVSGTITTSTEPSEDVKEEKT 174
            ..|.||...|...|:...||.:.::           :.:..:..:.|....|.....:::...|:
Mouse   247 DFPSAPTTADVPMEEQPKDLSRENI-----------SEDKNNCYNTSRNAATQVYSGDNIPRNKS 300

  Fly   175 DSLSL-------------IPDGAMVLSLNDFQA-----QDSITQQAEEKDPKKQQDEDEGQAKML 221
            |||.:             ||.|....|....|.     |:|:.:...|.||::.......|    
Mouse   301 DSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQ---- 361

  Fly   222 ELDPWDDENTPEHLYEIETPLIEESVVASPPLPLPPTHPANQQKKRTYRRVSPNVKHEKLTANVD 286
                             |.|:       |.|:.|...|.||          .|...|:|      
Mouse   362 -----------------EQPI-------SDPVLLGKNHEAN----------LPCESHQK------ 386

  Fly   287 DDFKAGSTTKRRNCERSPKI--CDVCGNTYKYQHALNAHMRRH-NNERPYSCEVCQKAFISNVEL 348
                       |.| |..|:  |:.|...:|:..:|::|.|.| |.:....|..|||.|....:.
Mouse   387 -----------RFC-RDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDR 439

  Fly   349 RRHMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFAYAHVLSAHRRTH 411
            |.|..:|..:||:.|..||:.||...:.|.||.|||||.||||.:|::.|..:.....|.|.:
Mouse   440 RTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNY 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:285071 10/46 (22%)
DUF2117 165..>273 CDD:303038 23/125 (18%)
COG5048 <303..439 CDD:227381 40/112 (36%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
zf-H2C2_2 319..344 CDD:290200 10/25 (40%)
zf-C2H2 333..355 CDD:278523 7/21 (33%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
zf-H2C2_2 347..371 CDD:290200 8/23 (35%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-H2C2_2 375..400 CDD:290200 14/24 (58%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
zf-H2C2_2 404..427 CDD:290200 2/8 (25%)
C2H2 Zn finger 419..439 CDD:275368
Zscan4cNP_001013787.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
SCAN <51..117 CDD:295388
zf-C2H2 395..417 CDD:278523 6/21 (29%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
zf-H2C2_2 438..463 CDD:290200 9/24 (38%)
C2H2 Zn finger 454..474 CDD:275368 8/19 (42%)
zf-H2C2_2 466..491 CDD:290200 14/24 (58%)
C2H2 Zn finger 482..500 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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