DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9215 and CTCF

DIOPT Version :10

Sequence 1:NP_573045.1 Gene:CG9215 / 32494 FlyBaseID:FBgn0030659 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_006556.1 Gene:CTCF / 10664 HGNCID:13723 Length:727 Species:Homo sapiens


Alignment Length:608 Identity:121/608 - (19%)
Similarity:197/608 - (32%) Gaps:249/608 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 APPAPMLVDKQQ---------EQLKL---DLEQAHVRLPATLKIRRLNVEPCSSSSVSGTITTST 163
            ||.|...||..|         |:..:   :|:...|.:|.|:.:...:||....:          
Human    83 APEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGA---------- 137

  Fly   164 EPSEDVKEEKTDSLSLI------PDGAMVLSLNDFQAQDSITQQAE---EKDPKKQQDED----- 214
            ..:|..||...:|..:|      |:|..|:.:. ...:....:|.|   ::||..|:|.|     
Human   138 YENEVSKEGLAESEPMICHTLPLPEGFQVVKVG-ANGEVETLEQGELPPQEDPSWQKDPDYQPPA 201

  Fly   215 ---------------EGQAKMLELDPWDDENTPEHLYEIETPLIEESVVAS--PPLPLPPTHPAN 262
                           ||:...:.:..:::|.....|.|:..    |.||.:  ||   .||....
Human   202 KKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNA----EKVVGNMKPP---KPTKIKK 259

  Fly   263 QQKKRTY----------RRVSPNVKHEKLTANVDDDFKAGSTTKRRNCERSPKICDVCG------ 311
            :..|:|:          ||           :|:|...|:       :.:..|..|.:||      
Human   260 KGVKKTFQCELCSYTCPRR-----------SNLDRHMKS-------HTDERPHKCHLCGRAFRTV 306

  Fly   312 -------NT---------------------------YKYQH-----------------ALNAHMR 325
                   ||                           ||:.|                 .|..|:|
Human   307 TLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIR 371

  Fly   326 RHNNERPYSCEVCQKAFISNVELRRHMRVHTGQKPYSCRHCERRFSDFGSSK------------- 377
            .|..|||:.|.:|..|.....:|:||||.|:|:|||.|..|..||:..|:.|             
Human   372 SHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK 436

  Fly   378 -----------------------------------------------KHERIHTGERPYVCEVCN 395
                                                           :|::.|..|:.:.|:.|:
Human   437 FHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCD 501

  Fly   396 KGFAYAHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQHRGSGNGEASVASSSADASSRN 460
            ........:..|:|||||:|.:.|:.|||.|.:|..|..|.:::.......|:...|....:...
Human   502 YACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 566

  Fly   461 QNASAR-------------------KESARKQQQIPESFSLDSVELEQTKVLEECIVANDFMFNE 506
            :|..||                   |:|.|.:::...|...||                    ::
Human   567 RNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDS--------------------SD 611

  Fly   507 EDNAEQEANDREGLQHDDSYPYV 529
            .:|||.:.:|.|    |:..|.|
Human   612 SENAEPDLDDNE----DEEEPAV 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9215NP_573045.1 zf-AD 16..92 CDD:462262
COG5048 <303..439 CDD:227381 55/252 (22%)
C2H2 Zn finger 307..327 CDD:275368 11/76 (14%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
zf-H2C2_2 347..371 CDD:463886 13/23 (57%)
C2H2 Zn finger 363..383 CDD:275368 7/79 (9%)
C2H2 Zn finger 391..411 CDD:275368 4/19 (21%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
CTCFNP_006556.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..211 7/30 (23%)
zf-H2C2_5 266..289 CDD:404746 5/40 (13%)
C2H2 Zn finger 268..288 CDD:275368 5/37 (14%)
zf-H2C2_2 280..305 CDD:463886 7/31 (23%)
C2H2 Zn finger 296..316 CDD:275368 4/19 (21%)
zf-H2C2_2 309..333 CDD:463886 2/23 (9%)
C2H2 Zn finger 324..347 CDD:275368 2/22 (9%)
zf-H2C2_5 351..375 CDD:404746 4/23 (17%)
C2H2 Zn finger 353..373 CDD:275368 3/19 (16%)
COG5048 <366..500 CDD:227381 30/133 (23%)
C2H2 Zn finger 381..401 CDD:275368 8/19 (42%)
C2H2 Zn finger 409..426 CDD:275368 6/16 (38%)
C2H2 Zn finger 439..457 CDD:275368 0/17 (0%)
C2H2 Zn finger 469..489 CDD:275368 1/19 (5%)
C2H2 Zn finger 497..517 CDD:275368 4/19 (21%)
zf-H2C2_2 509..534 CDD:463886 12/24 (50%)
C2H2 Zn finger 525..546 CDD:275368 8/20 (40%)
C2H2 Zn finger 557..573 CDD:275368 3/15 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..677 14/82 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 689..717
Blue background indicates that the domain is not in the aligned region.

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