Sequence 1: | NP_573045.1 | Gene: | CG9215 / 32494 | FlyBaseID: | FBgn0030659 | Length: | 560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001116268.1 | Gene: | ctcf / 100101689 | XenbaseID: | XB-GENE-862914 | Length: | 734 | Species: | Xenopus tropicalis |
Alignment Length: | 489 | Identity: | 115/489 - (23%) |
---|---|---|---|
Similarity: | 191/489 - (39%) | Gaps: | 125/489 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 LVDKQQEQLKLDLEQAHVRLPATLKIRRLNVEPCSSSSVSGTITTSTEPSEDVKEEKTDSLSLI- 180
Fly 181 -----PDGAMVLSLN-----DFQAQDSITQQAE---EKDP------KKQQDEDEGQAKMLELDPW 226
Fly 227 DDENTPEHLYEIETPLIE--------ESVVAS--PPLPLPPTHPANQQKKRTY----------RR 271
Fly 272 VSPNVKHEKLTANVDDDFKAGSTTKRRNCERSPKICDVCGNTYKYQHALNAHMRRHNNERPYSCE 336
Fly 337 VCQKAFISNVELRRHMRV-HTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFAY 400
Fly 401 AHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAH-MEQHRGSGNGEASVASSSADASSRNQNAS 464
Fly 465 ARKES----ARKQQQIPESFSLDSVELEQTKVLEECIVANDFMFNEEDNAEQEANDREGLQHDDS 525
Fly 526 YPYVGGYQSVDSVKELVGDLLDTEEFCDESKYMI 559 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9215 | NP_573045.1 | zf-AD | 16..92 | CDD:285071 | |
DUF2117 | 165..>273 | CDD:303038 | 31/147 (21%) | ||
COG5048 | <303..439 | CDD:227381 | 47/137 (34%) | ||
C2H2 Zn finger | 307..327 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 319..344 | CDD:290200 | 9/24 (38%) | ||
zf-C2H2 | 333..355 | CDD:278523 | 9/22 (41%) | ||
C2H2 Zn finger | 335..355 | CDD:275368 | 9/20 (45%) | ||
zf-H2C2_2 | 347..371 | CDD:290200 | 11/24 (46%) | ||
C2H2 Zn finger | 363..383 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 375..400 | CDD:290200 | 11/24 (46%) | ||
C2H2 Zn finger | 391..411 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 404..427 | CDD:290200 | 9/22 (41%) | ||
C2H2 Zn finger | 419..439 | CDD:275368 | 5/20 (25%) | ||
ctcf | NP_001116268.1 | zf-H2C2_5 | 264..287 | CDD:372805 | 5/40 (13%) |
C2H2 Zn finger | 266..286 | CDD:275368 | 5/37 (14%) | ||
zf-H2C2_2 | 278..303 | CDD:372612 | 7/31 (23%) | ||
C2H2 Zn finger | 294..314 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 307..331 | CDD:372612 | 9/23 (39%) | ||
C2H2 Zn finger | 322..345 | CDD:275368 | 10/22 (45%) | ||
zf-H2C2_5 | 349..373 | CDD:372805 | 6/23 (26%) | ||
C2H2 Zn finger | 351..371 | CDD:275368 | 5/19 (26%) | ||
COG5048 | <364..498 | CDD:227381 | 43/176 (24%) | ||
C2H2 Zn finger | 379..399 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 407..424 | CDD:275368 | 4/16 (25%) | ||
C2H2 Zn finger | 437..455 | CDD:275368 | 4/23 (17%) | ||
C2H2 Zn finger | 467..487 | CDD:275368 | 5/41 (12%) | ||
C2H2 Zn finger | 495..515 | CDD:275368 | 5/17 (29%) | ||
zf-H2C2_2 | 507..532 | CDD:372612 | 2/3 (67%) | ||
C2H2 Zn finger | 523..544 | CDD:275368 | |||
C2H2 Zn finger | 555..571 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24404 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |