DRSC/TRiP Functional Genomics Resources

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Protein Alignment cerv and MMS21

DIOPT Version :10

Sequence 1:NP_573043.1 Gene:cerv / 32492 FlyBaseID:FBgn0030657 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_010896.3 Gene:MMS21 / 856695 SGDID:S000000745 Length:267 Species:Saccharomyces cerevisiae


Alignment Length:244 Identity:43/244 - (17%)
Similarity:95/244 - (38%) Gaps:51/244 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QKFFKEMAEVVSDFSDGREIQKLLDQNVDLAENLIRMKSKHQLLSKAMKHAKNSSNTIEKFEEVW 82
            |:.:|::.|.::...|...     ...:.:.|.:..:.|.::|||.....:.:....|:..::.:
Yeast    35 QQCYKQIDETINQLVDSTS-----PSTIGIEEQVADITSTYKLLSTYESESNSFDEHIKDLKKNF 94

  Fly    83 KERSEAVEQKRIDVKNSAEFKN-----------FMKAAAPQAGAETNG----------------- 119
            |:.|:|..|  ||:....:::.           ::....|:.....|.                 
Yeast    95 KQSSDACPQ--IDLSTWDKYRTGELTAPKLSELYLNMPTPEPATMVNNTDTLKILKVLPYIWNDP 157

  Fly   120 -----QANSAAHDEDLIMEATGGEVFSLYDPWSKALIKNPVRNKKCGHIYDRDSVMLIITDNIGI 179
                 ...:.|.::||.:|  ||:: .|..|.:....:.|:.::||.|::|||.:...:......
Yeast   158 TCVIPDLQNPADEDDLQIE--GGKI-ELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTR 219

  Fly   180 RCPVLGCPNRSYIHPAHLVKDSNLQQKLQERMSDAIEKETSSEEDDEQA 228
            .||...|  ...:.....|:|..::.:.:      |.|...|:|.|:::
Yeast   220 DCPQAAC--SQVVSMRDFVRDPIMELRCK------IAKMKESQEQDKRS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cervNP_573043.1 SPL-RING_NSE2 145..209 CDD:438313 13/63 (21%)
MMS21NP_010896.3 COG5627 1..267 CDD:227914 43/244 (18%)

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