DRSC/TRiP Functional Genomics Resources

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Protein Alignment HPN and Ser6

DIOPT Version :10

Sequence 1:NP_002142.1 Gene:HPN / 3249 HGNCID:5155 Length:417 Species:Homo sapiens
Sequence 2:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster


Alignment Length:269 Identity:88/269 - (32%)
Similarity:129/269 - (47%) Gaps:46/269 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   158 LPVD--------RIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPER--NRVL 212
            |||.        |:|||.|....::|.|||||..|:|.||||:|:..::||||||....  |.|:
  Fly    19 LPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVI 83

Human   213 S-----RWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEY 272
            :     |:.:.||:..:.| .|:.:.|..|:.|..|..|        .||:||:.|.|||.|:..
  Fly    84 TPIAAERFTIRAGSNDRFS-GGVLVQVAEVIVHEEYGNF--------LNDVALLRLESPLILSAS 139

Human   273 IQPVCLPAAG-QALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKM 336
            |||:.||... .|.||   ..::|||..::.|.....||...:..|:...|.....:|  .:.::
  Fly   140 IQPIDLPTVDTPADVD---VVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG--FEGEL 199

Human   337 FCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT-GCALAQKPGVYTKVSDFREWI 400
            ......:.|  ||.||||||.|..:        :|.|:..:.. ||. :..|..|.:|..|::| 
  Fly   200 CLLHQVDNG--ACNGDSGGPAVYNN--------QLVGVAGFVVDGCG-STYPDGYARVFYFKDW- 252

Human   401 FQAIKTHSE 409
               ||.||:
  Fly   253 ---IKKHSD 258

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity