DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42299 and MMS21

DIOPT Version :10

Sequence 1:NP_727866.2 Gene:CG42299 / 32487 FlyBaseID:FBgn0259195 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_010896.3 Gene:MMS21 / 856695 SGDID:S000000745 Length:267 Species:Saccharomyces cerevisiae


Alignment Length:214 Identity:47/214 - (21%)
Similarity:76/214 - (35%) Gaps:84/214 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EVVSNSSDDGEKLLTKNSSNTIEKSEEVCKE---------------------------RPEAVEQ 55
            |..|||.|:..|.|.||    .::|.:.|.:                           .||....
Yeast    77 ESESNSFDEHIKDLKKN----FKQSSDACPQIDLSTWDKYRTGELTAPKLSELYLNMPTPEPATM 137

  Fly    56 MRIDVNNSLEDT-----------NYMNAVESEAQKNIAGLDEDLIMEDFGVEVV------PFHDP 103
                |||:  ||           |....|..:.| |.|. ::||.:|...:|:.      |:   
Yeast   138 ----VNNT--DTLKILKVLPYIWNDPTCVIPDLQ-NPAD-EDDLQIEGGKIELTCPITCKPY--- 191

  Fly   104 WSKLLIKHPVRNKRCGHIYDRETVLMIIKDNIGILCPVRDCPNLS---DIKLEHLVKDPDVE--- 162
                  :.|:.:::|.|::||:.:...::.     ...||||..:   .:.:...|:||.:|   
Yeast   192 ------EAPLISRKCNHVFDRDGIQNYLQG-----YTTRDCPQAACSQVVSMRDFVRDPIMELRC 245

  Fly   163 --------QELQKRKSDKI 173
                    ||..||.|..|
Yeast   246 KIAKMKESQEQDKRSSQAI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42299NP_727866.2 SPL-RING_NSE2 103..167 CDD:438313 15/77 (19%)
MMS21NP_010896.3 COG5627 1..267 CDD:227914 47/214 (22%)

Return to query results.
Submit another query.