DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42299 and Nsmce2

DIOPT Version :10

Sequence 1:NP_727866.2 Gene:CG42299 / 32487 FlyBaseID:FBgn0259195 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001361697.1 Gene:Nsmce2 / 68501 MGIID:1915751 Length:273 Species:Mus musculus


Alignment Length:162 Identity:40/162 - (24%)
Similarity:75/162 - (46%) Gaps:23/162 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LLTKNSSNTIEKSE----------EVCKERPEAVEQMR---IDVN-NSLEDTNYMNAVESEAQKN 80
            |..|||....:::|          |:.|:..:..|..|   .|.| :|....|..:.:.::.:.:
Mouse   111 LQDKNSDADFKENEKFVQFKQQLRELKKQLVKPKEDGRHSEFDPNKDSSRAGNKRDGIHADREND 175

  Fly    81 IA-GLDEDLIMEDFGVEVVPFHDPWSKLLIKHPVRNKRCGHIYDRETVLMII----KDNIGILCP 140
            :. |:|||:|:..   ....|..|.::|.:|.||:||.|||.|:.|.::.:|    |......||
Mouse   176 LTEGVDEDMIVTQ---SQTNFICPITQLEMKKPVKNKMCGHTYEEEAIVRMIESKHKRKKKACCP 237

  Fly   141 VRDCPNLSDIKLEHLVKDPDVEQELQKRKSDK 172
            ...|.: :|:::..|:.|..:.:.::.....|
Mouse   238 KIGCSH-TDMRMSDLIPDEALRRAIESHNKKK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42299NP_727866.2 SPL-RING_NSE2 103..167 CDD:438313 20/67 (30%)
Nsmce2NP_001361697.1 SPL-RING_NSE2 193..262 CDD:438313 21/69 (30%)

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