Protein Alignment Gmap and GC4

DIOPT Version :10

• Sequence 1: NP_001356946.1
• Gene: Gmap / 32483
• FlyBaseID: FBgn0027287
• Length: 1401
• Species: Drosophila melanogaster
• Sequence 2: NP_850447.1
• Gene: GC4 / 819225
• AraportID: AT2G46180
• Length: 725
• Species: Arabidopsis thaliana
• Alignment Length: 749
• Identity: 155/749 - (20%)
• Similarity: 328/749 - (43%)
• Gaps: 138/749 - (18%)

  Fly   672 DKRNKLLERNGEQLTKQQQQNQADQKKLEELSQLR---ETLQRRDEDLKELEEQLSAVRQDLDEK 733
            |:||.    ||.:.::....|..:.....|:.:.:   ..||:.:.::|.|....:|:   |.||
plant    41 DRRNS----NGFRYSRSPMANGFESPVNPEIERYKAEINKLQKSESEIKALSVNYAAL---LKEK 98

  Fly   734 SIQM-KISQDQHKLQLANLQNQLQADQEKLRELLQLQDKLEQQKELMEVDQNQQI------TIIK 791
            ..|: :::|:.     .:|:..|.:....|:         |.:.:|.....|..|      :..:
plant    99 EDQISRLNQEN-----GSLKQNLTSTNAALK---------ESRLDLSRASNNNAIKGNGDHSPNR 149

  Fly   792 KELAETT----NQLSE---CQERLTVKEAQLAEIQQQLQEVNEERTRLQEQLLTKEQESGLDSEL 849
            .:.:.|.    ||::.   .:...|..:::..:.:::..|:.|||||.......:|.|.
plant   150 SQRSPTNWKNRNQMNNGIASKPNGTENDSESHKKEKEFAEMLEERTRSMASAQARELEK------ 208

  Fly   850 AKRNQELEDQLLAKEQQLQLNQAELEKLQETLRVNEEQLLAK----EEQLHAKESQLQSLESQLQ 910
             :|.:....|:|.:|::.| |:...|:|| :||:::|:.|.:    ..:|.||.::::.|:.:|.
plant   209 -EREKSANLQILLQEERKQ-NETFKEELQ-SLRLDKEKTLMESNKVRRELDAKLAEIRQLQMKLN 270

  Fly   911 G--QLAADESQQ-LQQTIDGLGQEKNEL------IKVLQQKHQENTQYYAEIQRLQPFEQQVKEL 966
            |  |.|...|:: |::....|.:|.|||      ::...:..|::|.     ::|  |.:..::|
plant   271 GGEQHAFGISRENLKEVNKALEKENNELKLKRSELEAALEASQKSTS-----RKL--FPKSTEDL 328

  Fly   967 VKEREKL-QDQVGFLKEKSDILTTNLLTEQTNQRLLQQQQAESQEQQASTLRDLERLRAHLLEIE 1030
            .:....| :::.|....|.|:       |::.|| |:::..|::.::....::|:||:.||||.|
plant   329 SRHLSSLDEEKAGTFPGKEDM-------EKSLQR-LEKELEEARREKDKARQELKRLKQHLLEKE 385

  Fly  1031 ELHTQETVELQRDLEESR-----SRQAILEQQVSKSSTAYTSASIRANQQAETLQAQHALLQQQR 1090
            ...:::..|..|.::|.|     .|..||..:.:...|......|:::...| ::....:::...
plant   386 TEESEKMDEDSRLIDELRQTNEYQRSQILGLEKALRQTMANQEEIKSSSDLE-IRKSKGIIEDLN 449

  Fly  1091 DELLAKLGQYEDRELKQQAALTNLQCALEQFQNDKDHDIEMATQRIRREMQAQLDRQGQLQLEMS 1155
            .:|...|...:.:.::    |.|||.||.|:.    .:|| |.:...||:....:...:|...:.
plant   450 QKLANCLRTIDSKNVE----LLNLQTALGQYY----AEIE-AKEHFERELAVAKEDAMKLSARLK 505

  Fly  1156 GLQQQLAEANQGLRAAARLSDQLEAGQQTIAVLRDEVESLKEANGQ----LEQRLSSSESSQTDK 1216
            .:.:||..:.   :....::.::...:...|..::.|..:::.|.:    |||.::.......|.
plant   506 DVDEQLESSK---KEKEEITSKVLHAENIAAEWKNRVSKVEDDNAKVRRVLEQSMTRLNRMSMDS 567

  Fly  1217 ---IDKSLIKSLLIGYVVSGHAGDKQQVLRMISSVLDFNAQEADKVGLNKQQSS----------- 1267
               :|:.::..||:.|....|:   ::||.::..:|.|:.:|..::||.:|.::
plant   568 DFLVDRRIVIKLLVTYFQRNHS---REVLDLMVRMLGFSEEEKQRIGLAQQGAAGKGVVRGVLGF 629

  Fly  1268 ---WLGAILGGGSATA-SAAGSSRGNENLVQAFVQFL----EQESQPQAQSRPTLLSMTGQMDGV 1324
               .:|.|||||..:. |....:..|::....:|:||    |:..:.:|:            |..
plant   630 PGRLVGGILGGGGGSPDSHPNMASDNQSFADMWVEFLLKDAEERERREAE------------DAA 682

  Fly  1325 TSASATTSTAATS-GHLPQASSSFS--PATPAAS 1355
            .......:.::|. ....|:.|.||  |.|.:.|
plant   683 NKEQEKATVSSTQRPKYEQSDSEFSTVPLTSSNS 716

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gmap	NP_001356946.1	SMC_prok_B	169..973	CDD:274008	69/330 (21%)
		Smc	<645..>1195	CDD:440809	115/558 (21%)
GC4	NP_850447.1	EnvC	66..>271	CDD:443969	48/230 (21%)
		Smc	<175..>436	CDD:440809	67/284 (24%)
		SMC_N	<338..>555	CDD:481474	47/237 (20%)