Protein Alignment Gmap and SPBC119.12

DIOPT Version :9

• Sequence 1: NP_001356946.1
• Gene: Gmap / 32483
• FlyBaseID: FBgn0027287
• Length: 1401
• Species: Drosophila melanogaster
• Sequence 2: NP_595293.1
• Gene: SPBC119.12 / 2540061
• PomBaseID: SPBC119.12
• Length: 401
• Species: Schizosaccharomyces pombe
• Alignment Length: 467
• Identity: 105/467 - (22%)
• Similarity: 192/467 - (41%)
• Gaps: 105/467 - (22%)

  Fly   841 QESGLDSELAKRNQELEDQLLAKEQQLQLNQAELEKLQETLRVNEEQLLAKE--EQLHAKESQLQ 903
            :.:|.:::|.: |:.|::.|.....:.:.|:.:|.:....|:.|:|.|...|  ::|..||...|
pombe     3 ENAGNETKLVE-NENLQEDLSRLNLEDEKNELKLNEKGGVLKENDEHLECSESFKKLAEKEEAYQ 66

  Fly   904 SLESQLQGQLAADESQQLQQTIDGLGQEKNELIKVLQQKHQENTQYYAEIQRLQ----------- 957
            :|::....  ...:...|...:.|:   |:.|.:.|::..||..|....||.|:
pombe    67 TLKNSYNS--LKQQHSNLLGKVSGI---KSTLGERLKKDSQELAQNRKRIQELEKSLGDAEEALK 126

  Fly   958 -------PFEQQVKELVKEREKLQDQVGFLKEKSDILTTNLLTEQTNQRLLQQQQAESQEQQAST 1015
                   ....||:.|.::...|:.|...|.|::.:|:|.  ::|..:|  .:.:.|.||..|..
pombe   127 LSNEETVTLTAQVESLTQDITDLRQQNASLVEENQLLSTQ--SKQWERR--ARDEHEMQESLAVR 187

  Fly  1016 LRDLERLRAHLLEIEELHTQETVELQRDLEESRSRQAILEQQVSKSSTAYTSASIRANQQAETLQ 1080
            |.|.|...|...|.:|   |..||:||.|  :...|..:|.:.:|:|.......:..|.|
pombe   188 LADCEEQLARETERQE---QYEVEIQRHL--TNQHQLEIELESTKASHTENLGELTRNWQ----- 242

  Fly  1081 AQHALLQQQRDELLAKLGQYEDRELKQQAALTNLQCALEQFQNDKDHDIEMATQRIRREMQAQLD 1145
               ..:....::..:|..:|||.:.:..|....|...     :|.:|:::..|..|
pombe   243 ---KAMDDVTEKFASKSKEYEDLQNELDATQKRLSRV-----SDLEHEVKEKTLLI--------- 290

  Fly  1146 RQGQLQLEMSGLQQQLAEANQGLRAAARLSDQLEAGQQTIAVLRDEVESLKEANGQLEQRLSSSE 1210
              |:||.|...|.:.|.:|                    :.:|:|
pombe   291 --GKLQHEAVVLNEHLTKA--------------------LCMLKD-------------------- 313

  Fly  1211 SSQTDKIDKSLIKSLLIGYVVSGHAGDKQ-QVLRMISSVLDFNAQEADKVGLNKQQSSWLGAILG 1274
            .:..:||||.||.:|.:.::....|..|: ::|::||||||:|..:.::.||.:..||     :.
pombe   314 GNNAEKIDKQLISNLFVSFLTLPRADTKRFEILQLISSVLDWNDTQREQTGLQRPGSS-----VN 373

  Fly  1275 GGSATASAAGSS 1286
            ..|...||:.:|
pombe   374 NWSIPHSASSNS 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gmap	NP_001356946.1	Smc	161..983	CDD:224117	34/161 (21%)
		SMC_prok_A	799..>1185	CDD:274009	78/363 (21%)
SPBC119.12	NP_595293.1	SMC_prok_B	15..>285	CDD:274008	66/296 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR18921
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100