DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6324 and Semg1

DIOPT Version :10

Sequence 1:NP_001285273.1 Gene:CG6324 / 32481 FlyBaseID:FBgn0030647 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_059086.3 Gene:Semg1 / 53878 MGIID:1858275 Length:375 Species:Mus musculus


Alignment Length:351 Identity:68/351 - (19%)
Similarity:122/351 - (34%) Gaps:73/351 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FIDDQFFKKGKQNSGKSQKVMEQQPSKIKPMKPSEPMNPIQPVNLKGQINPIGPVNPMDQKIIKD 105
            |:..|....|:.....:|..:.|:.:.:|...........|..:.:.||...|.|....|  :|.
Mouse    64 FMQSQRRVYGQGGGDMTQTRVSQEHTSVKGAALCRNGQVSQLKSQESQIKSYGQVKSSGQ--LKS 126

  Fly   106 SVNPMGQIKPMNPMCQRNSMASVNPYGQIHPKGPVNPNPNGQMKHMGPMNLMEPGNPNGQINSM- 169
            ..:..||:|        :|::.:..|||:        ...||:|..||        ..||:.|. 
Mouse   127 GGSAFGQVK--------SSVSQIKSYGQL--------KSGGQLKSGGP--------AFGQVKSQE 167

  Fly   170 SQMNPMGQINIMSQM----NLMDQI-NLMSQMNLMGEPVNPNVQMKPMETFPNGQINPMEPMNPN 229
            ||:...||:....|:    :...|: :.:||:...|:..:...|:|..     ||   .:.....
Mouse   168 SQIKSYGQLKSSGQLKSGGSAFGQVKSSVSQIKSYGQLKSGGSQVKSY-----GQ---TKSYGEE 224

  Fly   230 GQMNSMSSMNPMGQ------MNPMDQMNLISQMNLMGGPVNPNGQMNPMEPGNPNGQINSMSQIN 288
            ||:||.|.:...|.      .....|.:..||:......:...||...::..:...|....:...
Mouse   225 GQLNSFSQLKSQGAQLKSYGQQKSQQQSSFSQVKSQSSQLKSYGQQKSLKGFSQQTQHKGFAMDE 289

  Fly   289 PMGQINRPVNPNGQMNRMEPGNPNGQMNSMSQMNLMRGPVNPNGQMNMNSYGQMNPMEPRNPNGQ 353
            .|.|:.:         :....:.:.|..|..||..         :.:::.:||      :...||
Mouse   290 GMSQVRK---------QFSDDDLSVQQKSTQQMKT---------EEDLSQFGQ------QRQYGQ 330

  Fly   354 MNAMSQMNLM---RGPVNPNGQMNMN 376
            ..:.|....:   |..|....:.|.|
Mouse   331 ERSQSYKGYLEQYRKKVQEQQRKNFN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6324NP_001285273.1 Med15 107..>444 CDD:312941 55/285 (19%)
Semg1NP_059086.3 Semenogelin 5..>88 CDD:368458 5/23 (22%)

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