DRSC/TRiP Functional Genomics Resources

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Protein Alignment mh and dvc-1

DIOPT Version :9

Sequence 1:NP_573032.1 Gene:mh / 32480 FlyBaseID:FBgn0267977 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001369944.1 Gene:dvc-1 / 179554 WormBaseID:WBGene00011834 Length:368 Species:Caenorhabditis elegans


Alignment Length:387 Identity:165/387 - (42%)
Similarity:210/387 - (54%) Gaps:57/387 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NLVDPEWELVDPTPDIYAMFIRFDEKFFQERLGAVSLEWSKKMYSCAGIC-YQ-RGNRFVKQVTI 171
            :||||.:||.||.|||:|:||:||.:||...|....::||.:||:||||| |: ||.| ....:|
 Worm     5 SLVDPSFELSDPCPDIHALFIQFDARFFGGSLACCEVKWSPRMYACAGICSYEIRGGR-GGLCSI 68

  Fly   172 RLSEPLLKLRPRKDLVETLLHEMIHAYCFVLNIREGNGGHGPNFKRIMETINKVAGTNITVYHTF 236
            |||:|||.||||.||||||||||||||.||........||||.|:..|..||:..|||||:||:|
 Worm    69 RLSKPLLTLRPRSDLVETLLHEMIHAYLFVKERNRDRDGHGPQFQAHMHRINQAGGTNITIYHSF 133

  Fly   237 HDEVASYRTHIWRCTGICRERSPFWGYVKRTSNRAPGPNDQWWKMHQRECSGTFLKLSEPPKAPK 301
            ||||..|:.|.|||:|.||:|.||:|||||:.||||||||:||..||:.|.|.|||:.|      
 Worm   134 HDEVRLYKQHWWRCSGPCRDRRPFFGYVKRSCNRAPGPNDRWWSQHQQSCGGNFLKVKE------ 192

  Fly   302 PETKSRAKKSTPAVAAPKEDIRNWFGQPSAKKAAT-GTVLLGDLAKAVPPTSYPGLSSEPFALPK 365
            ||...:.|.|      .:.:.:|..|.|:.||..| ..|.|.|..|.....|....:|:....|.
 Worm   193 PEGYGQGKGS------KRTNDKNKSGGPALKKTITPPRVTLDDFFKKDGKNSSDNSTSKSPTKPS 251

  Fly   366 TPAAGTKGNKSGG---FNELDKSGSKATTEMSGQGYSLGGSS--------------------AIE 407
            |......|.|.||   .:.|..|..|| |:.|| |..|||:|                    |.:
 Worm   252 TSLFTGSGQKLGGSSSTSSLLNSYPKA-TQNSG-GNRLGGTSGGVSRLLPPVNFTSPSSAPVAEQ 314

  Fly   408 HIDLSDTDVPDSAKLRQIRLQRFSEDASNKRQNKKKRRRVSSDSEIINWESYDDDVMVRDVH 469
            .|||.|:|..|        .|...:||       .:...|:||:.:| ..|.:.:||...:|
 Worm   315 VIDLGDSDDDD--------FQDMDDDA-------LEISFVASDNSVI-CPSCNTEVMENLIH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mhNP_573032.1 SprT-like 124..294 CDD:287265 102/171 (60%)
ZnF_Rad18 582..605 CDD:128973
dvc-1NP_001369944.1 SprT 18..190 CDD:214794 103/172 (60%)
ZnF_Rad18 345..367 CDD:128973 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159464
Domainoid 1 1.000 121 1.000 Domainoid score I3545
eggNOG 1 0.900 - - E1_KOG3931
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H102024
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007186
OrthoInspector 1 1.000 - - oto19199
orthoMCL 1 0.900 - - OOG6_104384
Panther 1 1.100 - - LDO PTHR21220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3918
SonicParanoid 1 1.000 - - X5295
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.770

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