DRSC/TRiP Functional Genomics Resources

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Protein Alignment mh and sprtn

DIOPT Version :9

Sequence 1:NP_573032.1 Gene:mh / 32480 FlyBaseID:FBgn0267977 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001106631.1 Gene:sprtn / 100127870 XenbaseID:XB-GENE-5845785 Length:436 Species:Xenopus tropicalis


Alignment Length:519 Identity:162/519 - (31%)
Similarity:245/519 - (47%) Gaps:113/519 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 MNLVDPEWELVDPTPDIYAMFIRFDEKFFQERLGAVSLEWSKKMYSCAGICYQRGNRFVKQVTIR 172
            :::|||.|||:||.|||.|:|:.|::.||..:|..:.::||.:|..|||:|...|...:  .:||
 Frog     3 LSVVDPTWELLDPNPDIRALFLEFNDTFFWGQLSGIEVKWSARMTLCAGVCSYEGRGGL--CSIR 65

  Fly   173 LSEPLLKLRPRKDLVETLLHEMIHAYCFVLNIREGNGGHGPNFKRIMETINKVAGTNITVYHTFH 237
            |||||||||||||||:|||||||||..||.:..:.:..|||.|.:.||.|||..|.||:|||.||
 Frog    66 LSEPLLKLRPRKDLVQTLLHEMIHALLFVTHNNKDHDSHGPEFCKHMERINKRTGANISVYHNFH 130

  Fly   238 DEVASYRTHIWRCTGICRERSPFWGYVKRTSNRAPGPNDQWWKMHQRECSGTFLKLSEPPKAPKP 302
            |||..||.|.|.|.|.|::|.|::|||||..||||...|.||..|||.|.|.|:|:.|      |
 Frog   131 DEVDEYRKHWWLCNGPCQKRKPYFGYVKRAMNRAPSSLDPWWADHQRTCGGEFVKIKE------P 189

  Fly   303 ETKSRAKKSTPAVAAPKEDIRNWFGQPSAKKAATGTVLLGDLAKAVPPTSYPGLSSEPFALPKTP 367
            |..|:.:|            ||                 .|     |..|..|.||.        
 Frog   190 ENYSQKRK------------RN-----------------ND-----PTKSELGNSSH-------- 212

  Fly   368 AAGTKGNKSGGFNELDKSGSKATTEMSGQGYSL---GGSSAIEHIDLSDTDVPDSAKLRQIRLQR 429
               .|.|| |..|.:|   .:.....||.||.|   ..|.|...|. :|....|.|      :..
 Frog   213 ---VKINK-GKSNGVD---IRTVIPFSGTGYKLFEPSKSDAQLKIQ-NDNPTKDKA------VMH 263

  Fly   430 FSEDASNKRQNKKKRRRVSSDSEIINWESYDDDVMVRDVHTPI-VNLVESSSDEEEMKMPAGRKT 493
            .:..::|:..:....|::.|..:|            ...:|.: :||     :...:|:|:....
 Frog   264 HTPPSTNQTDSTFLSRKIVSAKKI------------SVANTKVFINL-----NGSPIKLPSSSNN 311

  Fly   494 MTSQERTQIIKRQVMEDELTLCEDDILLIDDEYDDEVAANESLTAATELADQS---------IID 549
            .:.|:.::  ::.|:....|..::.|        |..::::|..:.::..::.         .:|
 Frog   312 KSHQDSSK--QKSVLHFFKTQKDNSI--------DLTSSSQSFPSTSQGPNREETEHFYKKLQMD 366

  Fly   550 DIFGEDTLLKEFQRENDV-----QPSCSSYAKRIENDI----VSCPICFEKMRRTELSNHFDGC 604
            |...:||.:.....:.:|     ..||:..|..|.:.:    |.||:|..::..:::::|.|.|
 Frog   367 DKESKDTFIIHSLNKTNVSDSLNNKSCAGPAATINSGLNHTKVCCPVCGTEIFESKINDHLDTC 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mhNP_573032.1 SprT-like 124..294 CDD:287265 91/169 (54%)
ZnF_Rad18 582..605 CDD:128973 7/27 (26%)
sprtnNP_001106631.1 SprT-like 19..127 CDD:370932 56/109 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..219 17/86 (20%)
SHP-box. /evidence=ECO:0000250|UniProtKB:Q9H040 231..239 4/7 (57%)
PIP-box. /evidence=ECO:0000250|UniProtKB:Q9H040 271..277 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..321 3/22 (14%)
ZnF_Rad18 408..431 CDD:128973 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5941
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1171375at2759
OrthoFinder 1 1.000 - - FOG0007186
OrthoInspector 1 1.000 - - oto104156
Panther 1 1.100 - - LDO PTHR21220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3918
SonicParanoid 1 1.000 - - X5295
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.050

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