DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip128 and AT1G20570

DIOPT Version :10

Sequence 1:NP_573030.2 Gene:Grip128 / 32478 FlyBaseID:FBgn0026433 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001322746.1 Gene:AT1G20570 / 838645 AraportID:AT1G20570 Length:985 Species:Arabidopsis thaliana


Alignment Length:439 Identity:82/439 - (18%)
Similarity:159/439 - (36%) Gaps:118/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   718 ERLKSNPVLMANILKRLERSTCL--QLKSELP-EALREILR---------------------RRQ 758
            |.|...|.|:.:...:|..|..|  |..|.|| ..|..|||                     |||
plant   573 ETLFPFPTLLPSFQSKLHMSEFLPYQKNSTLPSRVLSWILRTEPRNTLLPVVIMQECFTINIRRQ 637

  Fly   759 ----------WLANEYAIRAYCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEK----NN 809
                      .|.||:         ::..::..||...||....|...:...:|.|:.|    |:
plant   638 VDNISKVIFSKLMNEW---------KLMHELAVLRAIYLLGSGDLLQHFLTVIFDRLGKGESSND 693

  Fly   810 SWALGSVLTSKL----CAVLLPHYPQLAHYL--------------HVKLISQINSNSIKVY--EA 854
            .:.|..::...:    ..:||.....|...:              .||.:|....:|:..|  :.
plant   694 DFELNIIIQESIRNSADTMLLSSPDALVVSISSEGCLDRDKDDKGDVKSLSSPRESSVNNYAIDC 758

  Fly   855 LEAIELDFERPMAMHQWYILTPAHMQDYNSVWRLMLKVKWAVWKLENMQFL--------RRARFN 911
            ||:::..::.|..:.  .|.....::.||.|...:||||.|.:.|:..:.|        .:.|.:
plant   759 LESLKFTYKVPWPLE--LIANSEAIKKYNQVMGFLLKVKRAKYVLDKARRLMWKGKGSATKIRKH 821

  Fly   912 PCAPLDLIGLTIRRLEIVRFWLIFLINNLHAHIMEAVS----RQFELRIGECKNVRELRIMHDEH 972
            .|              ::...|:..::..|.::|:.|.    |:....:.:..::.|:..:|:.:
plant   822 HC--------------LLEQKLLNFVDAFHQYVMDRVYHTAWRELCEAMVKAGSLDEVIDVHETY 872

  Fly   973 LAWLKTHCMLTDEFKAFRVALDQIFHLVYVLDMEWTTCASCMHDHDALCLDVTISDDGIDDSETQ 1037
            |..::..|.:..| |.:.:...:| :::..|.:|:.:            :..|:|..|...:...
plant   873 LLSIQRQCFVVQE-KLWAIIASRI-NMILGLALEFYS------------IQQTLSSGGAVSAIKA 923

  Fly  1038 RRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLSALEETI 1086
            |..:|      :..||..:..|   :|.:|..|..:.:.|....|.:.:
plant   924 RWEME------IDRIEKQFEDC---IAFLLRVLTSKKNVGHFPHLADLV 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip128NP_573030.2 GCP5_NTD 25..130 CDD:439339
GCP_N_terminal 371..>574 CDD:465456
GCP_C_terminal <873..1082 CDD:461187 39/220 (18%)
AT1G20570NP_001322746.1 GCP_N_terminal <227..344 CDD:465456
GCP_C_terminal 655..972 CDD:461187 61/348 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.