DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip128 and Grip75

DIOPT Version :9

Sequence 1:NP_573030.2 Gene:Grip128 / 32478 FlyBaseID:FBgn0026433 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_609412.1 Gene:Grip75 / 34441 FlyBaseID:FBgn0026431 Length:650 Species:Drosophila melanogaster


Alignment Length:579 Identity:107/579 - (18%)
Similarity:216/579 - (37%) Gaps:122/579 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   563 ALEDHLREF--IVEFCYEEDANTRSHVRK------------RNMGMEDDLL----LVEIFNKLQS 609
            |||::..|.  :.::|...:.|:.|:|..            ||:..|..:|    .|.:.|..|.
  Fly    89 ALEEYYAEIGRLEKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNLHQQ 153

  Fly   610 CPLYQLLLEHALESGETQDLLCSVNTLSEMLTSNNEIQLPSLHDELFTQFFAQLKVYCGADNTDY 674
            |....:.||.|::       :......:...:|.....|..:.|::.::||.:.......|.:.:
  Fly   154 CEHGDIQLEKAIK-------IIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKFTPTDAVDGSSF 211

  Fly   675 -----------EDEPEPDKDYEDLTVCNRQGIRNHELFAIFTQPLVEQRL------------ERQ 716
                       |..||   ||     ..:..:...:|...|:..|.|:.|            ...
  Fly   212 SKSATCSLLSAEKNPE---DY-----IWQYEVNMSQLPGFFSIVLAEKVLFVGQTVLVFKMGRNV 268

  Fly   717 RERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRAY------------ 769
            :.:.|::|  :|..|..|:.....||.|....   |..:....|:||..|..:            
  Fly   269 KVKNKTDP--LAAKLAELDSDDIYQLWSGRES---EFFKMVVDLSNEDTINVFRLEKVIIDIKNY 328

  Fly   770 ---------CKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTS-KLCAV 824
                     ..|..:..:|..::...||.:...::.:.:.:...||........:|..| :|.|.
  Fly   329 VSARLSEIAVNEVDLERQMGLIKDFFLLGRGEFYLEFCSQMVGTMETYREERFKNVTRSFELAAT 393

  Fly   825 LLPHYPQLAHYLHVKLISQINSNSIKVYEALEAIELDFERPMAMHQW---YILTPAHMQDYNSVW 886
            :......|..:..:...|....:....:..|:.:.|.:|     ::|   .:.:|..::.||:::
  Fly   394 VTGITDDLDKFSLICQRSTSEPDDTSDFNFLQGLSLKYE-----YEWPLNLLFSPTTIERYNNIF 453

  Fly   887 RLMLKVKWAVWKLENM---QFLRRARFNPCAPLDLIGLTIRRLEIVRFWLIFLINNLHAHI-MEA 947
            |.:|.::...::::.:   |..|........|.:.| :|:|.      :|:|.:||:..:| ::.
  Fly   454 RFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKI-ITLRN------YLMFFLNNMQYYIQVDV 511

  Fly   948 VSRQFELRIGECKNVRELRIMHDEH---LAWLKTHCMLTDEFKA-FRVALDQIFHLVY-VLDMEW 1007
            :..||.:.:...|:..:..::...|   ||.:.:||.|.:|.:. ..|...|..:.:| .|...:
  Fly   512 LESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLLNESETQLNVTGSQNRNPIYGTLLKLF 576

  Fly  1008 TTCASCMHDHDALCLDVTISDDGIDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADI 1066
            ..|....|        :|.:.|..||.|.     |...||:...:::..:  .|:|.|:
  Fly   577 GICEKFAH--------MTQTKDPSDDLED-----EVDQLNESFGVQIASL--IQLLVDV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip128NP_573030.2 Spc97_Spc98 373..>580 CDD:282045 5/18 (28%)
Grip75NP_609412.1 Spc97_Spc98 25..548 CDD:282045 87/490 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455396
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19302
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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