DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15642 and Tmem17

DIOPT Version :10

Sequence 1:NP_573028.1 Gene:CG15642 / 32476 FlyBaseID:FBgn0030642 Length:183 Species:Drosophila melanogaster
Sequence 2:NP_001010961.1 Gene:Tmem17 / 360985 RGDID:1310566 Length:198 Species:Rattus norvegicus


Alignment Length:176 Identity:44/176 - (25%)
Similarity:79/176 - (44%) Gaps:21/176 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ANLVLQMLLQANTYVSMVWAMSYMIHMLIRLHHLWNLEGLSMLVAYVLAVSAESVRLYAGYSVNL 74
            ::|.|||.|..|:|...:|.:|.::.:.::...|.:.....::...:|....|::|||.|...||
  Rat    39 SSLPLQMSLYFNSYFFPLWWVSCIVMLHLKYSVLPDYYKFIVITVVILITLIEAIRLYLGCMGNL 103

  Fly    75 ---CSGATAMWMLLTVTPCILLPAMVFLRLSAAGRSLWLRIITNAVFALIVLEVIVSLVHFVICK 136
               .......|:|..:   :.||.::||.|:...::|.|....:::|.:.:...::|.  |:..|
  Rat   104 QEKVPELAGFWLLSLL---LQLPLLLFLLLNEGLKNLPLEKAIHSIFTVFLTFQVISA--FLTLK 163

  Fly   137 PGCKLPLPLEGNEQLPEEDEEEQQQSASVGTPTTNEQKRRVRRYPE 182
               |:...|.....|.:.|    |.|||..|      .||.|:..|
  Rat   164 ---KMVNQLAARFHLQDFD----QLSASSAT------GRRARQSSE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15642NP_573028.1 Transmemb_17 16..121 CDD:462907 25/107 (23%)
Tmem17NP_001010961.1 Transmemb_17 45..151 CDD:462907 25/108 (23%)

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