DRSC/TRiP Functional Genomics Resources

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Protein Alignment shtd and EMB2771

DIOPT Version :9

Sequence 1:NP_573025.2 Gene:shtd / 32473 FlyBaseID:FBgn0004391 Length:2030 Species:Drosophila melanogaster
Sequence 2:NP_001331419.1 Gene:EMB2771 / 830439 AraportID:AT5G05560 Length:1807 Species:Arabidopsis thaliana


Alignment Length:2060 Identity:531/2060 - (25%)
Similarity:842/2060 - (40%) Gaps:531/2060 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EEELYVNRNTVVWTQGVNDDDDTDNGVYRRMCFTTDTPVRFACFLNRSFVRGRLAQLKAAVHPDD 190
            |.||::..|.::||.|        :.|.:|  ||..:.|..||:.|..  ||..|.|        
plant    61 EHELFIRDNCIIWTSG--------SRVLKR--FTLSSAVIKACWSNLG--RGTEAFL-------- 105

  Fly   191 DHLTAICVMDQDALRVYCSNGEDFLANLDFPVSQLWQTKYGLLLE-------------------- 235
                  ||:....|.:|.::||.....|...|..:|....|||||                    
plant   106 ------CVLQIACLTIYNTSGEVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPIL 164

  Fly   236 ---------KDSSNA------------LISHMSIP-MPRLFSMSHPLHEACPVVLKTATGSTGYM 278
                     |:..|:            |||...:| |.....:..||.|..|..:: ..|....|
plant   165 GSREMLRQRKEVGNSSPQNFHSPVAHDLISKRDMPCMSSHLILRDPLEEPGPTYVE-ERGKLTIM 228

  Fly   279 TEPEYTVVFTTEESDLVMLYDAKFFKHFVARLRKVTPEEINYVSQQMELGQTLMGPRSMAGNSFS 343
            .:.:...::|::...|:..|:....:|.|        ....::...:|.               |
plant   229 KDYDERTIWTSDRLPLMTSYNKGKMQHSV--------WAAEFIESNLEA---------------S 270

  Fly   344 STKQTGATPKATNLSFAARNINTTTTGMGNQFGLSQSQSFSGVLGQSNRASLGTPLSQLQSSISQ 408
            ::..:|..|.|.                     ||:..||                         
plant   271 ASCSSGIVPDAV---------------------LSKRVSF------------------------- 289

  Fly   409 QSMSVKDMRKLTHVKPAKPIEPELCMEHIWTENIYGTQREFCEMATRAFIHTDLVGQTFLCYLLA 473
                    |::...|.||                        :.|::.|:.|| .....:|:|:.
plant   290 --------RRIWQAKGAK------------------------KAASKVFLATD-NSVPVICFLIL 321

  Fly   474 R-----SCRLQLVRLTGYGRGEVQ--LSTHASTLAAKDAV--------GLKRMHMIAVLDPSGSL 523
            .     |..||.|.:......:|:  :|...|.:||...|        ||.....|.||.|...|
plant   322 EQKKLLSVGLQTVEINNEILFDVKPDISWSVSAIAAAPVVVTRSQVKIGLLPHLDIIVLSPENDL 386

  Fly   524 LLYTGTVLISKVHITPFLAPTSIPTPLVTPMTAAPSPSASPAPSHVKTPMAAAGPASGIPSGSSS 588
            .||:|...:.:..:..:|                                   |.:.|...|.|:
plant   387 FLYSGKQCLCRYVLPSWL-----------------------------------GESIGSGDGESA 416

  Fly   589 FVEVRRSSLLPTKAPGDVAAFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLVYATG 653
            ..:   |.....|..|                                 |.|.....:.|.....
plant   417 KTD---SGFRNLKITG---------------------------------LSDAVLGSINLSVNHS 445

  Fly   654 RMLRIALPFLNDTRLLTRCVATLRQVLSPTQFLDFV-IRW---YSDRNPPGSRNYSIEQEWLLFR 714
            ::.|.||.....:.|...|:|.:.:.|....:..|: :.|   :||..  ||   ||..||....
plant   446 QIFRCALTGKPSSSLANDCIAAIAEGLRSDLYSLFLSLLWGDGHSDLQ--GS---SIHFEWEALC 505

  Fly   715 STLLALMGLTAAPDVDAGENYARCATPPLHTQFGGGATATESSDGSSCSSNSTLGGQDEPKKRRI 779
            :..|.:                 |..|                         |:..:.:||..  
plant   506 NIFLEI-----------------CQKP-------------------------TVVHRKQPKTA-- 526

  Fly   780 YNDCDDFTDDDWEFLLLQ-------------TTLAPCGADG-------HSYSVNIGALLFRMIPA 824
                   ::..|||||:.             |::.....:|       ......:|:....|:.:
plant   527 -------SESSWEFLLISKFHKTYSRFHNGITSINRLDLEGIVPFDSKICSEETLGSSCELMVQS 584

  Fly   825 IFFSLHLLYEDLKLDADFYGALPYLATFLHQLAIDMQLESYVLHYILDFPELSNRTGKLSLLGAE 889
            : ..||.:||.||:|......|.:||..|..:|..:..:.|:.:||.|||.||...|..:.|.:.
plant   585 L-DCLHAVYESLKMDNLRKQDLHHLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGACTTLSSS 648

  Fly   890 HGAMMLHQELLRVPAPSVFAQLEHIIVGEEEVMPYTFLECVNERSRILLQLV-----SLVTHGHE 949
                       |.| |::|..||:.:          ...|::.....|..|:     |:|:...:
plant   649 -----------RKP-PNLFRWLENCL----------RRGCLSTNFDDLPDLIRRDGCSIVSWARK 691

  Fly   950 RLNYWWQLL-------EIPGAVQANFTRRSKRNITADAPRSHQMLQ--LLLAM---RLTRRDIER 1002
            .::::..|.       .:...|..|.           ||.|:...:  .:|||   |.....::.
plant   692 VVSFYSVLFGDKPEGRTLSSGVPCNI-----------APGSYSCNEELTILAMAGERFGLHQLDL 745

  Fly  1003 FPAAVHLIVAEALEEARLSPPMGCSMATYELILRPELAAHAQLPF-------LETSTG------- 1053
            .|:.|.|.:..||:..|.|||.......|.|:.|.::|......|       ::::|.       
plant   746 LPSGVSLPLRHALDSCRESPPADWPAIAYVLLGREDMALSVFRNFSSSKEFEMQSNTSLISMSIP 810

  Fly  1054 -QPHCGRVYKEDSLSARCPPTGGSETDSPAQLRRDDMDNMDTKLLRLRFPDDMRVDEVRRLLNSS 1117
             ..|...|....|.|.....|...:|:|......|.|:::.....:||:..|:|::||||||.|:
plant   811 YMLHLHPVIVPSSESIGLENTKIEDTNSVDGSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSA 875

  Fly  1118 EPVVIEVQQAPGTSDHEFIEEQEKQLFALCSRTMTLPVGRGMFTLRTMLPRPSESLTMPKLCLLG 1182
            .|||::....|..||.   |:|:..|:.:..||..||:|||.|||.|:....:|:.|:|||.|.|
plant   876 RPVVVQTAANPTISDQ---EQQQDHLWRIAQRTAVLPLGRGAFTLSTIHTLLTEAFTVPKLVLAG 937

  Fly  1183 KEPLKGTTI-----EMQQIEFPANMQMWPSFHNGVATGLKISPQAQDIDSNWIVYNKPKTHSHNA 1242
            :.|.:...|     .::.|:   .::.||.|||.||.||:::|....:...||.||||  ...||
plant   938 RLPSQQNAIVNLDPNIRNIQ---ELKTWPEFHNAVAAGLRLAPLQGKVSRTWIRYNKP--GEPNA 997

  Fly  1243 LEHAGFLMALGLNGHLKTLSFMSVYKYLVKCDEMTNVGLLLGISAAHRGTMDTKTTKLLSVHLEA 1307
            : |||.|..|||.|:|..|:...:|:|..:..|.|.|||:||::|::||||.....|.|..|:.|
plant   998 V-HAGLLFGLGLQGYLHVLNLSDIYQYFTQDHESTTVGLMLGLAASYRGTMQPDIAKALFFHVPA 1061

  Fly  1308 LLPATAMELDIPQSTQVAAIMGVGLLYQGSAKRHIAEVLLQEIGRPPGPEMENSIERESYAMTAG 1372
            ...|:..|.:||...|.||::.||:|::|||.:...::||.||||....  :|.:|||.||::||
plant  1062 RYQASYTEFEIPTLLQSAALVSVGMLFEGSAHQQTMQLLLGEIGRRSAG--DNVLEREGYAVSAG 1124

  Fly  1373 LSLGLVTLGQGESPAGLRDLQLPDTLHYYMVGGVKRPIGGSQKEKYRLASFQVREGDTVNIDVTA 1437
            .|||||.||:|....|..| .|.:.|..|:....:|.|.....|.:|.|: |:.:|.|.|:|:||
plant  1125 FSLGLVALGRGGDALGSMD-SLVNRLLLYLGAKEERSILVPSLEDHRSAA-QITDGSTSNVDITA 1187

  Fly  1438 PGATLALGLMFFNSGNAAIAEWMQPPDSRYLLDMVRPDFLLLRTISRGLILWQDVRPDNAWFQAQ 1502
            |||.:||.||:..:.:..|...:..|.:.|.|:.|||||::||.|:|.||:|..:.|...|.|:|
plant  1188 PGAIIALTLMYLKTESEVIFSKLSIPQTHYDLECVRPDFIMLRVIARNLIMWSRICPTCDWIQSQ 1252

  Fly  1503 FPRALR---AHLKLPFYENEYAPED----YDVDYEAISQAYCNIMAGAAFCIGLKYAGTEN---- 1556
            .|..::   :.|:          :|    |:||.||:.|||.||:|||...:||::|||.:    
plant  1253 VPEVVKNGISQLR----------DDMDNMYEVDVEALVQAYVNIVAGACISLGLRFAGTRDGNAR 1307

  Fly  1557 --LVAFAT-LRSVIKDFLRFPS----RPMGECAGRTTVESCLMVLLISISLVFAGSGNCEILRII 1614
              |.::|. |.:.||.....|.    |.:.:...|.|:|.||.:::||:|:|.||||:.::.|::
plant  1308 DLLNSYALYLLNEIKPLSATPGNAFPRGISKFVDRGTLEMCLYLIIISLSVVMAGSGDLQVFRLL 1372

  Fly  1615 RFLRSRVGPQYPHITYGSHMAIHMSLGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRY 1679
            ||||||.... .|..||:.||:.::.|.||||.|..|.|....|:|.|:...:|:.|...||||.
plant  1373 RFLRSRNSAD-GHANYGTQMAVSLATGFLFLGGGMRTFSTNNGSLAMLLITLYPRLPSGPNDNRC 1436

  Fly  1680 HLQALRHLYVLAVEPRLFLPRDIDTNKLCLANISVLEVGA------TELRRLPIAPCILPVLSTL 1738
            ||||.|||||||.|.|.....|:|:.   |...:.|||..      :|.:...|.|||||..:.|
plant  1437 HLQAFRHLYVLATEARWLQTIDVDSG---LPVYAPLEVTVKETKLYSETKFCEITPCILPERAIL 1498

  Fly  1739 QQVVVDDENYWPVCFE---RSRNW----DQLEKALEMSAPIDIKKRTGCLSHLEDPDRLKSMLAQ 1796
            :::.|....|||...|   ..:||    |:.:..  .|..|.:|::.|..|:::||...:|:|::
plant  1499 KRICVCGPRYWPQQIELVPEEKNWWSFGDKSDPF--SSGVIYVKRKVGACSYVDDPVGCQSLLSR 1561

  Fly  1797 TL-------TMEQSIC-----WQIDMNDLQQ----FASERMVKQFLSRCLDTKGTDLSPPELMKR 1845
            .:       |:.:|..     .::|.:.:..    |:|:..:..|...|.|....:.|..| .|.
plant  1562 AMHKVFGLRTLGESNLIANSHRELDSDSVDHLVSTFSSDPSLIAFAQLCCDKSWNNRSDSE-FKE 1625

  Fly  1846 HQVMLLFYNAVVKDRMHFLPVYLTLY-------DHVTKS---MPNNIDVWQMKLIDAY-----LS 1895
            ..:.:|| :.:.|||...|.|||:||       |.:.||   |.:::.:..:|:..||     ..
plant  1626 FCLQVLF-DCISKDRPALLQVYLSLYTTIGSMADLLVKSDSNMCDSLSISSLKVALAYNEAVSTG 1689

  Fly  1896 RSQESEHPLISVELIQMMQELFKQEMEDSTRELCLPLREFLSRRRLDPSYVTTVSGP-----DLQ 1955
            |...|...:.|:.|..:.:..  :|:.:.:.||.:.||          :|:|:.:.|     .||
plant  1690 RLASSGGFVQSIFLASLRKRC--EEVLNCSTELKINLR----------NYLTSEAWPYDKNSKLQ 1742

  Fly  1956 RAFCVINYY----NL-LPNMLNGV--------DLSTGTVNYMRLL 1987
            :...::::|    |: .|:::...        ..||..:..:|||
plant  1743 KDIIILSWYLKWFNVPSPSIIKAAVEKIKSKSKNSTSAIPLLRLL 1787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shtdNP_573025.2 ANAPC1 195..298 CDD:289618 29/144 (20%)
EMB2771NP_001331419.1 ANAPC1 104..206 CDD:403918 22/115 (19%)
PC_rep 1289..1322 CDD:396429 10/32 (31%)
APC1_C 1595..1758 CDD:407956 42/176 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 422 1.000 Domainoid score I119
eggNOG 1 0.900 - - E1_KOG1858
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7414
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D738153at2759
OrthoFinder 1 1.000 - - FOG0005152
OrthoInspector 1 1.000 - - oto3079
orthoMCL 1 0.900 - - OOG6_102115
Panther 1 1.100 - - LDO PTHR12827
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.780

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