DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shtd and anapc1

DIOPT Version :9

Sequence 1:NP_573025.2 Gene:shtd / 32473 FlyBaseID:FBgn0004391 Length:2030 Species:Drosophila melanogaster
Sequence 2:XP_005157123.1 Gene:anapc1 / 568795 ZFINID:ZDB-GENE-081107-12 Length:1932 Species:Danio rerio


Alignment Length:2122 Identity:706/2122 - (33%)
Similarity:1059/2122 - (49%) Gaps:323/2122 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIAVAEPPLEFVPRGRQTSAEHPGPHDQPMARHQLPTTEHLLLQRLQNVNISSAGEDCPSGGQES 65
            |||..|.. .|||.||:....|             |...:|.|::||..:             |.
Zfish    11 MIAAGELQ-SFVPFGREHCKNH-------------PNAVNLQLRQLQPAS-------------EL 48

  Fly    66 WTVRELYDDYEASEERAALRRKLTERT------KRCGLQATSLPNRLLNPPLVRRVEPMCDYMVN 124
            |          :|:..|.|...|.|.|      :|..|:..:.|:.                 |.
Zfish    49 W----------SSDGAAGLVGSLQEVTLQERDKERWQLRKGTAPDD-----------------VE 86

  Fly   125 NEEELYVNRNTVVWTQGVNDDDDTDNGVYRRMCFTTDTPVRFACFLNRSFVRGRLAQLKAAVHPD 189
            .:|||||..|.|:|::|..:....   ||:  .||.|:||:.|.:.|.:..:.: ..:|..|.  
Zfish    87 YDEELYVAGNMVIWSRGSKNQASC---VYK--AFTVDSPVQQALWCNFTVPQAK-KDVKDVVE-- 143

  Fly   190 DDHLTAICVMDQDALRVYCSNGEDFLANLDFPVSQLWQTKYGLLLEKDSSNALI-SHMS----IP 249
                ..:|::....:.|:..:|:||::.|.|.||.||.||:|||||:  .|..: .|||    .|
Zfish   144 ----QTVCIVQSTCVNVHSMSGKDFISPLPFQVSALWPTKFGLLLER--KNITVDGHMSPISREP 202

  Fly   250 MPRLFSMSHPLHEACPVVLKTATGSTG-------YMTEPEYTVVFTTEESDLVMLYDAKFFKHFV 307
            :|.||||.|||.|..|||.|    |||       |:::....||||..:..::|.||.:...|.|
Zfish   203 LPTLFSMLHPLDEIAPVVCK----STGLFETRLQYVSDSALRVVFTCLKPSIIMTYDTQQCTHTV 263

  Fly   308 ARLRKVTPEEINYVSQQMELGQTLMGPRSMAGNSFSSTKQTGATPKA--TNLSFAARNIN----- 365
            ..|||||.||.|.|.:                  |........||.|  :.||...||:|     
Zfish   264 WNLRKVTSEEQNTVLK------------------FPDQSGPAHTPNAAPSFLSTHLRNVNRLDSP 310

  Fly   366 ------------------------TTTTGMGNQFGLSQSQ-------SFSGVLGQSNRASLGTPL 399
                                    ..:..:.|...||::.       ||||  .|....|..||.
Zfish   311 ASPLHCHALHNQSRIPASPALHSRVHSPSISNMAALSRAHSPGIAVPSFSG--NQRFNMSCHTPS 373

  Fly   400 SQLQSSISQQSMSVKDMRKLTHVKPAKPIEPELCMEHIWTENIYGTQREFCEMATRAFIHTDLVG 464
            |:..|.::..:.::.|    |.:...:||.|:||:|.:|||....::.:.|: |::.||.:||..
Zfish   374 SRGHSILASPNSTLND----TLLPEMEPILPDLCIEQLWTETSAISREKGCQ-ASKVFITSDLCE 433

  Fly   465 QTFLCYLLARSCRLQLVRLTGYGRGEVQLSTHASTLAAKDAVGLKRMHMIAVLDPSGSLLLYTGT 529
            ..:||:|:....:|:.|:..........:....||:|||||..|:.:|.:.||:.:|||:||||.
Zfish   434 NRYLCFLVESHQQLRCVKFLESNETSQLIFATVSTIAAKDAAPLEDIHTMLVLEANGSLVLYTGV 498

  Fly   530 VLISKVHITPFLAPT-SIPTPLVTPMTAAPSPSASPAPSHVKTPMAAAGPASGIPSGSSSFVEVR 593
            ..:|||.:...|:|| |:|..  .|:.:.|..:.| .|:.......:.....|:||.    |...
Zfish   499 TRVSKVFVPGLLSPTFSVPNQ--PPILSTPLENIS-TPARATVQHMSRLEEVGMPSP----VLEM 556

  Fly   594 RSSLLPTKAPGDVAAFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLVYATGRMLRI 658
            ||||...:     :::.||    ||.|         |.....::||||..||:||..::|.||||
Zfish   557 RSSLQHNE-----SSWLEE----SPFQ---------QTAPRIQTLRDPVCNRVTLELSSGSMLRI 603

  Fly   659 ALPFLNDTRLLTRCVATLRQVLSPTQFLDFVIRWYSDRNPPGSRNYSIEQEWLLFRSTLLALMGL 723
            .:|.:..:.|:.||:..:|.:|.....:..:::||:..|.||..  |:..||.||.:.|:.:||.
Zfish   604 TIPEVATSELVKRCLQAIRFILPKDTAMKVLVKWYNSYNAPGGP--SMHLEWNLFVTCLMTMMGY 666

  Fly   724 TAAPDVDAGENYARCA-TPPLHTQFGGGATATESSDGSSCSSNSTLGGQDEPKKRRIYNDCDDFT 787
                      |..|.. |..||.:.                   .|......||.|   ..|..:
Zfish   667 ----------NTERLTWTRNLHFEV-------------------PLSPVIAAKKAR---PADTGS 699

  Fly   788 DDDWEFLL------------------LQTTLAPCGADGHSYSVNI--GALLFRMIPAIFFSLHLL 832
            |:||.:|.                  |:....|.|.|....::.:  .||||..||.:|:.||||
Zfish   700 DEDWLYLRCSDYHWQVSMRPAVSVQGLEMLFPPAGVDDQESALGLESSALLFPHIPLLFYVLHLL 764

  Fly   833 YEDLKLDADFYGALPYLATFLHQLAIDMQLESYVLHYILDFPELSNRTGKLSLLGAEHGAMMLHQ 897
            |||||||.........|...|.|||.|:|||.::..|..|||.......:..::......:|...
Zfish   765 YEDLKLDELQRSGARALVGLLQQLARDLQLEDFIDLYWRDFPSFIKTFKEACVIDQAQMELMTWP 829

  Fly   898 ELLRVPAPSVFAQLEHIIVGEEEVMPYTFLECVNERSRILLQLVSLVTHGHE------RLNYWWQ 956
            ..|...||.||..:...:.| ::|.|:.:|..:.||:::|:...:|...|.|      .|.|   
Zfish   830 VFLNGEAPCVFNWISRCLRG-QDVAPFPYLPGICERTKLLVLSYALYVVGDEDACSTNMLKY--- 890

  Fly   957 LLEIPGAVQAN----FTRR--SKRNITADAPRSHQMLQLLLAMRLTRRDIERFPAAVHLIVAEAL 1015
            |..:....:.|    |.||  |.:.|::....:.:::..|.:...|.:|:|..|..|.|.:.:|:
Zfish   891 LCRLSAGQKKNASDPFLRRQSSVKPISSSGCLAEKLVLWLTSAGFTLKDLETVPFGVALPIRDAI 955

  Fly  1016 EEARLSPPMGCSMATYELILRPELAAHAQLPFLETSTGQPHCGRVYKEDS---LSARCPPTGGSE 1077
            .:.|..|....|.....||.|.:|            |.|.|...:....|   |:....|...||
Zfish   956 YQCREHPCSDWSEEVCALIGRQDL------------TRQAHKVTLANRKSTVGLNVMLEPPVSSE 1008

  Fly  1078 TDSPAQLRRDDMDNMDTKLLRLRFPDDMRVDEVRRLLNSSEPVVIEVQQAPGTSDHEFIEEQEKQ 1142
            .|.    ..|.|.::..::..|.:..|:||.||||||.||.||.:.|...|..||||:|||:|.:
Zfish  1009 ADE----EEDGMTDLHPEVTALIWSQDLRVQEVRRLLQSSRPVRVNVPHLPEISDHEYIEEKENK 1069

  Fly  1143 LFALCSRTMTLPVGRGMFTLRTMLPRPSESLTMPKLCLLGKEPLKGTTIEMQ--QIEFPANMQMW 1205
            |..||.|||:||||||:|||.:..|.|:|.|.:|||.|.|:.|.:.|.:::.  .|:.|.||..|
Zfish  1070 LLQLCQRTMSLPVGRGLFTLFSYHPVPTEPLPVPKLNLTGRAPPRNTMVDLNSGNIDVPPNMTSW 1134

  Fly  1206 PSFHNGVATGLKISPQAQDIDSNWIVYNKPKTHSHNALEHAGFLMALGLNGHLKTLSFMSVYKYL 1270
            ||||||||.||||:|.:| ::|.||.|||||: :..|.|:|||||||||||||..|:.::::.||
Zfish  1135 PSFHNGVAAGLKIAPASQ-VESAWIAYNKPKS-AELANEYAGFLMALGLNGHLTKLATLNIHDYL 1197

  Fly  1271 VKCDEMTNVGLLLGISAAHRGTMDTKTTKLLSVHLEALLPATAMELDIPQSTQVAAIMGVGLLYQ 1335
            .|..|||::|||||:|||..||||...|:|||:|:.||||.|:.|||:|.|.||||::|:||:||
Zfish  1198 TKGHEMTSIGLLLGVSAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHSVQVAAVVGIGLVYQ 1262

  Fly  1336 GSAKRHIAEVLLQEIGRPPGPEMENSIERESYAMTAGLSLGLVTLGQGESPAGLRDLQLPDTLHY 1400
            |:..||.|||||.|||||||||||...:||||::.|||:||:|.||.|.:..|:.||.:|:.|:.
Zfish  1263 GTGHRHNAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQ 1327

  Fly  1401 YMVGGVKRPIGGSQKEKYRLASFQVREGDTVNIDVTAPGATLALGLMFFNSGNAAIAEWMQPPDS 1465
            |||||.:|...|..:||::..|:|::||||:|:|||.|||||||.:::..:.|.::|:|::.||:
Zfish  1328 YMVGGHRRTHAGINREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSVADWLKAPDT 1392

  Fly  1466 RYLLDMVRPDFLLLRTISRGLILWQDVRPDNAWFQAQFPRALRAHLKLPFYENEYAPEDYDVDYE 1530
            .:|||.::|:||||||::|.||:|.::.|:..|..:..|:.::.::.    ..:..|...|::.|
Zfish  1393 MFLLDFIKPEFLLLRTLARCLIMWDEIFPNADWVTSNVPQIIQENIG----NQDQTPVSEDLNME 1453

  Fly  1531 AISQAYCNIMAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPMGECAGRTTVESCLMVLL 1595
            .:.||:..|:||....:|.::||:.|..||..|....|:|::..:.......|:..:::||.::|
Zfish  1454 TLVQAHDYIIAGGCLAVGFRFAGSANSDAFDCLYKFAKNFMQCLTTSTATVTGQYNLQTCLSMVL 1518

  Fly  1596 ISISLVFAGSGNCEILRIIRFLRSRVGPQYPHITYGSHMAIHMSLGLLFLGAGRFTISQTPESIA 1660
            :::|:|.:||||.::|::.|||..|.   :..:.||.|||.||:|||||||.||:|:|.:..:||
Zfish  1519 LAVSMVMSGSGNLKVLQLCRFLHKRT---FGEMNYGFHMAHHMALGLLFLGGGRYTLSTSNSAIA 1580

  Fly  1661 ALVCAFFPKFPIHSNDNRYHLQALRHLYVLAVEPRLFLPRDIDTNKLCLANISV-------LEVG 1718
            ||:||.:|.||.||.||||||||||||.|||.||||.:|.|:|:.|.|.|.:.|       .|..
Zfish  1581 ALLCALYPHFPAHSTDNRYHLQALRHLAVLAAEPRLLVPVDVDSLKPCYALLDVTYKETQWYEET 1645

  Fly  1719 ATELRRLPIAPCILPVLSTLQQVVVDDENYWPVCFERSRNWDQLEKALEMSAPIDIKKRTGCLSH 1783
            ..||    :||.:||.|..|:::.|....||.:..:.|:....|:..|.....:.:|.|.|.|.:
Zfish  1646 TVEL----MAPTMLPELHLLKRIKVKGPRYWELNIDISKGTQHLQSILSRDGVLYVKLRAGQLPY 1706

  Fly  1784 LEDPDRLKSMLAQTLTMEQSICWQIDMNDLQQFASERMVKQFLSR-CLDTKGTDLSPPELMKRHQ 1847
            .:||...||:||..|....:.........:..|.|:..:..|... |        ...|.||..|
Zfish  1707 KDDPQGWKSLLAPNLNNRSAEVRTFKPEAISTFTSDAALVSFAEHFC--------RASENMKHRQ 1763

  Fly  1848 --VMLL---FYNAVVKDRMHFLPVYLTLYDHV----TKSMPNNIDVWQMKLIDAYLSRSQESEHP 1903
              |.||   .|..|.::....||.|:::...|    ...:.....:||:||: ..|..|:.:...
Zfish  1764 ETVALLSAILYECVTQENPEMLPTYISIEQAVRTLERADLSETFSLWQLKLV-LELCESRLARAL 1827

  Fly  1904 LISVELIQMMQELFKQEMEDSTRELCLPLREFLSRRRLDPSYVTTVSG-PDLQRAFCVINYYNL- 1966
            |:|.|.:.:|:....:.::....:....|:|:|.|:        |::| .|:....|.:.|::: 
Zfish  1828 LLSSEFLPIMKSSADRALDHWLCDNSNVLKEYLRRQ--------TMNGDTDVNMLACFLVYHSIP 1884

  Fly  1967 -LPNMLNGVDLSTGTVNYMRLLYEFRRLNLGAHTIFGLMKIL 2007
             |.||| ..||. |..::..||.:..:|.:....:..|..:|
Zfish  1885 SLKNML-ASDLE-GCSSFPELLLKSSQLGVPIRALLRLSPLL 1924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shtdNP_573025.2 ANAPC1 195..298 CDD:289618 45/114 (39%)
anapc1XP_005157123.1 ANAPC1 147..>199 CDD:289618 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587112
Domainoid 1 1.000 881 1.000 Domainoid score I52
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7414
Inparanoid 1 1.050 969 1.000 Inparanoid score I304
OMA 1 1.010 - - QHG46987
OrthoDB 1 1.010 - - D323458at33208
OrthoFinder 1 1.000 - - FOG0005152
OrthoInspector 1 1.000 - - oto40386
orthoMCL 1 0.900 - - OOG6_102115
Panther 1 1.100 - - LDO PTHR12827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R68
SonicParanoid 1 1.000 - - X3674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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