DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shtd and cut4

DIOPT Version :9

Sequence 1:NP_573025.2 Gene:shtd / 32473 FlyBaseID:FBgn0004391 Length:2030 Species:Drosophila melanogaster
Sequence 2:NP_595158.1 Gene:cut4 / 2539639 PomBaseID:SPBC106.09 Length:1458 Species:Schizosaccharomyces pombe


Alignment Length:1860 Identity:445/1860 - (23%)
Similarity:736/1860 - (39%) Gaps:508/1860 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RVEPMCD---YMVNNEEELYVNRNTVVWTQGVNDDDDTDNGVYRRMCFTTDTPVRFACFLNRSFV 175
            |||.:.|   |:||:    ::||                  |:.   :|.|.....|..:. :|.
pombe    25 RVEIIGDAVHYIVND----HLNR------------------VFN---YTVDQQKIHAALIT-TFA 63

  Fly   176 RGRLAQLKAAVHPDDDHLTAICVMDQDALRVYC---SNGEDFLANLDFPVSQLWQTKYGLLLEKD 237
            .|:               .||.|:..|...||.   :|.:.::.|:.|.....|.:..||.|::.
pombe    64 SGK---------------KAIVVILDDIGYVYYVGDNNNDSYIINVPFSTESAWSSPSGLYLQRH 113

  Fly   238 SSNALISHMSIPMPRLFSMSHPLHEACPV------VLKTATGSTGYMTEPEYTVVFTTEESDLVM 296
            .|:.  .:::..:|.:|.::.||.|...:      :|....           ::|:...|  :|:
pombe   114 RSSD--ENLNTDLPHIFCLNDPLDELTLIKFDGKKILSLFD-----------SIVYVVGE--IVV 163

  Fly   297 LYDAKFFKHFVARLRKVTPEEINYVSQQMELGQTLMGPRS-MAGNSFSSTKQTGATPKATNLSFA 360
            .::.|..|....|.|.:.||.          .|::...|: ...:|||..|....| ::.::.:.
pombe   164 THNKKEKKLSFWRSRFIDPES----------DQSIKSSRNRRRESSFSREKNPDLT-RSDSIHYT 217

  Fly   361 ARNINTTTTGMGNQFGLSQSQSFSGVLGQSNRASLGTPLSQLQSSISQQSMSVKDMRKLTHVKPA 425
            |   ||..:....:.||:.|..||                                         
pombe   218 A---NTRLSEKFEEQGLAYSTIFS----------------------------------------- 238

  Fly   426 KPIEPELCMEHIWTENIYGTQREFCEMATRAFIHTDLVGQTFLCYLLARSCRLQLVR-LTGYGRG 489
                      ||.:..|.|:......:.....:.|.||.:....|::.    .:||| .:.|...
pombe   239 ----------HIESFPITGSTSFDSILGNGVLVITTLVKELEKGYMML----FRLVRDRSPYFLD 289

  Fly   490 EVQLSTHASTLAAKDAVGLKRMHMIAVLDPSGSLLLYTGTVLISKVHITPFLAPTSIPTPLVTPM 554
            .:||  ||..|:   |:..|.:..|.||...|.:.|                             
pombe   290 SLQL--HAINLS---AIKSKHLQKIVVLSSKGKVSL----------------------------- 320

  Fly   555 TAAPSPSASPAPSHVKTPMAAAGPASGIPSGSSSFVEVRRSSLLPTKAPGDVAAFEEELHMLSPI 619
                           ::||:.:.|..|                                      
pombe   321 ---------------ESPMSPSLPIEG-------------------------------------- 332

  Fly   620 QPQPVSYTQRQAHNVCKSLRDPAGNRLTLVYATGRMLRIALPFLNDTRLLTRCVATLRQVLSPTQ 684
                 ::...:.|.....|.|          ..|....|:|.......|:..|::.:|.||.   
pombe   333 -----TFRSFRVHGATLYLED----------TDGVQRYISLDNRASNSLVKWCLSVIRYVLP--- 379

  Fly   685 FLDFVIRWYSDRNPPGSRNYSIEQEWLLFRSTLLALMGLTAAPDVDAGENYARCAT----PPLHT 745
                            .|.|.|     .:...|.||.....:.|.....:...|.|    ..:|.
pombe   380 ----------------LREYEI-----FYTGHLYALFAFKLSHDEAFISSILACFTFFSRDKVHV 423

  Fly   746 QFGGGATATESSDGSSCSSNSTLGGQDEPKKRRIYNDCDDFTDDDWEFLLLQTTLAPCGADGH-S 809
                                       ||     ..||::......:|...:..|.......| .
pombe   424 ---------------------------EP-----IEDCNEAYSLSSKFHFKKEILIASQLSSHLD 456

  Fly   810 YSVNIGALLFRMIPAIFFSLHLLYEDLKLDADFYGALPYLATFLHQLAIDMQLESYVLHYILDFP 874
            ||.....|:     .:..:||.:.|:|:||:........|...|.|:...::...|..:|..|..
pombe   457 YSTFKNYLM-----PLAITLHFISEELRLDSVVKPRKDQLVALLLQITTWLKWPRYCEYYNFDIA 516

  Fly   875 ELSNRTGKLSLLGAEHGAMMLHQELLRVPAPSVFAQLEHIIVGEEEVMPYTFLECVNERSRILLQ 939
            |                      ..|.:|. |:...:|. .||...::.: .:||:  ||:..:.
pombe   517 E----------------------TFLSIPL-SIQVDVEE-PVGPTSILQW-IIECL--RSQSTVP 554

  Fly   940 LVSLVTHGHERLNYWWQLLEIPGAVQANFTRRSKRNITADAPRSHQMLQLL-------------- 990
            ...|.::|            :|.:....|            |::..::|||              
pombe   555 FYGLESYG------------LPHSCSTMF------------PQTLSLMQLLDCLLNPNMTLQNLV 595

  Fly   991 ---LAMRLTRRDIERFPAAVHLIVAEALEEA--RLSPPMGCSMATYELILRPELAAHAQLPFLET 1050
               :.:.::|:..||:|..:..|:...||.|  ..||    :..:.||.|...|...:   ||..
pombe   596 EEMVRLGISRKRCERYPFGILCIIFTVLEIAAEEYSP----NWESEELRLVNRLDVDS---FLHP 653

  Fly  1051 STGQPHCGRVY-KEDSLSARCPPTGGSETDSPAQLRRDDMDNMDTK-------LLRLRFPDDMRV 1107
            .|.:    .|: |:|...........:.|||..         :||:       :..:.|.:|.|:
pombe   654 KTPK----WVFNKQDQEVKEIKALTSTVTDSTL---------VDTQSFHPYKVVTDMIFREDRRL 705

  Fly  1108 DEVRRLLNSSEPVVIEVQQAPGTSDHEFIEEQEKQLFALCSRTMTLPVGRGMFTLRTMLPRPSES 1172
            .||.:|||.|..:.|..:..  ..|...:..|:|....:|.||:::|:|.||.|..:..|.|:|.
pombe   706 AEVNKLLNYSSQITIMTEHF--DVDLSSVPMQQKVAQCICVRTLSVPIGAGMLTYGSKNPLPTEK 768

  Fly  1173 LTMPKLCLLGKEPLKGTTIEMQQIEF-PANMQMWPSFHNGVATGLKISPQAQDIDSNWIVYNKPK 1236
            :| |:|.........||.|.....|| ...:..||.|:.|||.||.||..:::|:::||::|:|:
pombe   769 VT-PRLFNFTLHLHPGTLIIQPNKEFVTQELTEWPEFNVGVALGLSISKFSKEINTSWIMFNRPE 832

  Fly  1237 THSHNALEHAGFLMALGLNGHLKTLSFMSVYKYLVKCDEMTNVGLLLGISAAHRGTMDTKTTKLL 1301
            |.:   ..|||||..||||||||.|:....:.||....:.|::|||||:::::.|:||.|.||||
pombe   833 TLT---AYHAGFLFGLGLNGHLKALATWHSFIYLTSKHDTTSIGLLLGLASSYLGSMDAKVTKLL 894

  Fly  1302 SVHLEALLPATAMELDIPQSTQVAAIMGVGLLYQGSAKRHIAEVLLQEIGRPPGPEMENSIERES 1366
            |||:.||||..:.||:|...||.|.|:|:|||:..|..|.::||.::||......|::|    |.
pombe   895 SVHISALLPVGSNELNISPLTQTAGILGIGLLFHDSCHRRMSEVTMEEILASNESELKN----EG 955

  Fly  1367 YAMTAGLSLGLVTLGQGESPAGLRDLQLPDTLHYYMVGGVKRPIGGSQKEKYRLASFQVREGDTV 1431
            |.:.||.||||:.||:|.:..|:.||:|...|.          :|.|.:     |:||       
pombe   956 YKLAAGFSLGLINLGRGSNLPGMSDLKLVSRLQ----------VGISSQ-----ATFQ------- 998

  Fly  1432 NIDVTAPGATLALGLMFFNSGNAAIAEWMQPPDSRYLLDMVRPDFLLLRTISRGLILWQDVRPDN 1496
            :::..:|||.:||.:::..:.:..:|:.:..|.||||||..|||.:|||...:.||:|.:|:.|.
pombe   999 SLEAGSPGAIMALTMIYMKTNDLEVAKKIDIPKSRYLLDFYRPDLILLRVAGKNLIMWDEVKADY 1063

  Fly  1497 AWFQAQFPRALRAHLKLPFYENEYAPEDYDVDYEAISQAYCNIMAGAAFCIGLKYAGTENLVAFA 1561
            .|.:.|.|..:.:...|  .|.:....|..:.|        |::||..|.:||::|||.|..|..
pombe  1064 EWVKYQIPDIMLSQFDL--QEKKVLSSDDLLLY--------NVLAGICFSLGLRFAGTGNPKAKE 1118

  Fly  1562 TLRSVIKDFLR---FPSRPMGECAGRTTVESCLMVLLISISLVFAGSGNCEILRIIRFLRSRVGP 1623
            .|.:.:..|:|   .|::...|.....||..|..::.:|.|.|.||..:.::||.:|.|..|:.|
pombe  1119 ILINFLDSFIRLCHLPAKTHDERVTAVTVIRCTQIVALSSSCVMAGYCDLDVLRRLRVLHGRMEP 1183

  Fly  1624 QYPHITYGSHMAIHMSLGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRYHLQALRHLY 1688
                :.||:.||.||:||:|.||.||:::|::..:||||:.:|:|:||..:.|||.||||.|:|:
pombe  1184 ----VNYGAQMATHMALGILSLGGGRYSLSRSNLAIAALLISFYPQFPRTTQDNRAHLQAARNLW 1244

  Fly  1689 VLAVEPRLFLPRDIDTNKLCLANISVLEVGATELRRLPIAPCILPVLSTLQQVVVDDENYWPVCF 1753
            .||||.|..:||:.||.:.|:..::|::.... :::|. ||.:||...::..|....:.||.:..
pombe  1245 ALAVEERCIIPRNQDTKQPCIVPLNVVQKSGA-VQKLE-APILLPPYDSISSVSTLGDKYWNLKI 1307

  Fly  1754 ERSRNWDQLEKALEMSA----PIDIKKRTGCLSHLEDPDRLKSMLAQTLTMEQSICWQIDMNDLQ 1814
            :...|.|..|...|...    |.|   ||   |..|:|..|...|..|    .|..|        
pombe  1308 DLDNNSDYRELLRESQTLTLMPYD---RT---SSKEEPLNLFPKLKDT----SSPLW-------- 1354

  Fly  1815 QFASERMVKQFLSRCLDTKGTDLSPPELMKRHQ-----VMLLF---YNAVVKDRMHFLPVYLTLY 1871
                 .:||  .||...:..:.|:...|.:.:.     |.||.   ::.:.:||:..|.:.|..:
pombe  1355 -----NLVK--TSRLFQSSNSPLNVASLQESNNKTSLGVKLLLSMDFDNLTRDRLLSLQILLQFF 1412

  Fly  1872 DHVTKSMPNNIDVWQMKLIDAYLSRSQESEHPLISVELIQ 1911
            :          ..|...|::.:.||    ::..:|.:|::
pombe  1413 E----------SCWTGVLLNKFHSR----QYLFLSRDLVE 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shtdNP_573025.2 ANAPC1 195..298 CDD:289618 23/111 (21%)
cut4NP_595158.1 ANAPC1 68..>112 CDD:289618 13/43 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1858
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005152
OrthoInspector 1 1.000 - - oto100625
orthoMCL 1 0.900 - - OOG6_102115
Panther 1 1.100 - - LDO PTHR12827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R68
SonicParanoid 1 1.000 - - X3674
TreeFam 1 0.960 - -
109.800

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