DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11655 and slc10a6

DIOPT Version :9

Sequence 1:NP_573024.1 Gene:CG11655 / 32472 FlyBaseID:FBgn0030638 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_002936511.1 Gene:slc10a6 / 100488946 XenbaseID:XB-GENE-988401 Length:355 Species:Xenopus tropicalis


Alignment Length:335 Identity:91/335 - (27%)
Similarity:156/335 - (46%) Gaps:42/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 NDSTLDVKIKRPKRVVDDIFLGTIILLMSLLYISFGAALNLDVLRGLITRPTGPCIGFVMQVVGM 198
            ||:|.|   .....::..||..|:.::::|:..|.|..:....:.|.:.||.|..||.|.|...|
 Frog    13 NDTTTD---SEGYGILSTIFSTTMTVMLALVVFSMGCTVEALKVWGHLRRPWGIIIGLVCQFGLM 74

  Fly   199 PLLSYALGVFIFPQAPAMQLGLFFTGISPSGGASNTWSAVLGGNIHLSVLMTTVSNVAAFATIPL 263
            ||::|.|.: .|...|...:.:...|..|.|..||.::..:.|::.||:.||:.|.:.|...:|.
 Frog    75 PLIAYLLAI-TFSVKPTQAVAILIMGCCPGGVISNIFTLWVDGDMDLSISMTSCSTILALGMMPF 138

  Fly   264 WTITLGQLIFERA-----GIKVPYGKIASYSSSLVLPLLLGLLVQKRMPQVARVLVRLLKPVSAF 323
            ..     .|:.|:     .||:||..|.....|:|:|:..|:.|..:.|..|:::.:....:...
 Frog   139 CL-----FIYSRSWELAKSIKIPYYNIGMALFSVVIPVGFGVFVNYKWPNQAKIISKAGSIIGGL 198

  Fly   324 IILFIIVFAIINNFYLFYLFSW----QIVVAGMALPGLGYIFAFLAAKLLHQNAADALTIAIETG 384
            ::|.|.|.:.:     .|..||    .|::..:..|.||||..|..|.::.|......|||:|||
 Frog   199 LMLVIGVASAV-----LYKGSWDTDLSILLIAIIYPLLGYISGFGLAVIVQQPWKRCRTIALETG 258

  Fly   385 IQNTGIAIFLLTTTLE---SPEADIT----TVVPVSVAVMTPLPLLGIY-LYNR--CWGNKRISE 439
            .||    :.|.:|.|:   :|:..:.    .::..|..::..:.|:.:| ||.|  |.....|||
 Frog   259 AQN----VHLSSTVLQLSFTPKQLVQMFTFPMIYASFQLLNGMLLVAVYQLYKRKYCCRTTEISE 319

  Fly   440 ASATASEAER 449
                 :::||
 Frog   320 -----NQSER 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11655NP_573024.1 SBF 151..416 CDD:302790 76/280 (27%)
slc10a6XP_002936511.1 bass 24..308 CDD:188087 80/298 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1148347at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10361
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3973
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

Return to query results.
Submit another query.