Protein Alignment Scamp and SCAMP4

DIOPT Version :10

• Sequence 1: NP_573023.2
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_563686.1
• Gene: SCAMP4 / 839464
• AraportID: AT1G03550
• Length: 283
• Species: Arabidopsis thaliana
• Alignment Length: 317
• Identity: 88/317 - (27%)
• Similarity: 132/317 - (41%)
• Gaps: 65/317 - (20%)

  Fly    18 NPFADPAIQQARRLQSGAALVSLEDYNPFEEQAKPQLQINSTNTAAVVQPLSQNIPPPQTSSLGA 82
            |||||                  |:.|||..........||     .::||     ||:....||
plant     7 NPFAD------------------EEINPFANHTSVPPASNS-----YLKPL-----PPEPYDRGA 43

  Fly    83 SA-----PSTSIQITSEELQRRQEELDRKAAELDRREQQL--QGNVPQLNNWPPLPDNFCVKPCF 140
            :.     ....::....|||.::.||.||..||.|||..:  .|.|.:..|||..      .|..
plant    44 TVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEF------FPLI 102

  Fly   141 YQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLI-------LLFHAGEFET-FFLAIFYT 197
            :.|...|||...||:.        :...|.|..::|.|:       :.:..||..| :.|:|.|.
plant   103 HHDIPNEIPIHLQKIQ--------YVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYF 159

  Fly   198 MLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLY----SIVQAVGFNKMGYCGFITAIG 258
            :...|.:||.|:||.|:|.|.||:..|..|||.|.|...:    ::...|.|......||:.||.
plant   160 LAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIE 224

  Fly   259 QFDGQASGIIVGILLLNVAFCFTAVAVANVLMITKIHSIYRSTG-ASMAKAQAEFTT 314
            .....|:   |||:....|..|....:.|:.:|.::::.:|.:| |:..|.:|..:|
plant   225 LLTTNAA---VGIMYFIGAGFFCIETLLNIWVIQQVYAYFRGSGKAAEMKREATKST 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_573023.2	SCAMP	125..301	CDD:461193	52/187 (28%)
SCAMP4	NP_563686.1	bZIP	<56..81	CDD:473870	11/24 (46%)
		SCAMP	92..264	CDD:461193	52/188 (28%)