Protein Alignment Scamp and Scamp3

DIOPT Version :9

• Sequence 1: NP_001259572.1
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_113912.1
• Gene: Scamp3 / 65169
• RGDID: 68351
• Length: 350
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 148/354 - (41%)
• Similarity: 209/354 - (59%)
• Gaps: 39/354 - (11%)

  Fly     9 NPF---GEPNLDNPFADPAIQQARRLQSGAALVSLEDYNPFE--EQAKPQLQINSTNTAAVVQP- 67
            |||   ||  |||||.|||:.|.|..|..|   :|:.|||||  ||..|..:..:...|.:..|
  Rat     9 NPFPDSGE--LDNPFQDPAVIQHRPSQQYA---TLDVYNPFENREQPPPAYEPPAPAPAPLPPPS 68

  Fly    68 -----LSQNIPPPQTSSLGASAPSTSIQITSEELQRRQEELDRKAAELDRREQQLQ-----GNVP 122
                 .|:.:.|.:..:.|:.:...:....:.||.::||||:|||.||||||::||     |...
  Rat    69 APSVQSSRKLSPAEPKNYGSYSTQATAAAATAELLKKQEELNRKAEELDRRERELQHVALGGAGT 133

  Fly   123 QLNNWPPLPDNFC-VKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLI-LLFHAG 185
            :.||||||| :|| |:|||:||..:|||.||||.|..:||:|:..|:.||.|....|. .....|
  Rat   134 RQNNWPPLP-SFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFFACLARFCVDTG 197

  Fly   186 EFETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFNKMGY 250
            ....|.|::.:.:||:|.|:|||:||.|||||:||||||.|||||:|.|.::.::||:|....|:
  Rat   198 SGSGFGLSMLWLLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVFFVLQAIGIPGWGF 262

  Fly   251 CGFITAIGQFDGQASGIIVG------ILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQ 309
            .|:::|:         ::||      :|:|.||..||.:||..::|:.:|||:||.||||..|||
  Rat   263 SGWVSAL---------VVVGSNPAVAVLMLLVALLFTGIAVLGIVMLKRIHSLYRQTGASFQKAQ 318

  Fly   310 AEFTTEFLRNQHVQEAASSAVNTAINSQF 338
            .||......|..|:.||::|...|..:.|
  Rat   319 QEFAAGVFSNPAVRTAAANAAAGAAENAF 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_001259572.1	SCAMP	125..301	CDD:282056	83/183 (45%)
Scamp3	NP_113912.1	SCAMP	135..310	CDD:282056	83/184 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	185	1.000	Domainoid score	I3290
eggNOG	1	0.900	-	-		E1_KOG3088
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D544579at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.820