Protein Alignment Scamp and Scamp2

DIOPT Version :9

• Sequence 1: NP_001259572.1
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: XP_017451383.1
• Gene: Scamp2 / 65168
• RGDID: 68348
• Length: 372
• Species: Rattus norvegicus
• Alignment Length: 373
• Identity: 133/373 - (35%)
• Similarity: 198/373 - (53%)
• Gaps: 57/373 - (15%)

  Fly     4 SGLDENPFGEPNLDNPFADPAIQQARRL-QSGAALVSLEDYNPFEE----QAKPQLQINSTNTAA 63
            |..|.|||.:|...|||.||::.|.... |||     |.::|||.|    ...|..|:...:..|
  Rat     2 SAFDTNPFADPVDVNPFQDPSVTQLTSAPQSG-----LAEFNPFSETNAATTVPVTQLPGPSQPA 61

  Fly    64 VVQPLSQNIPPPQTSS---------------LGASAPSTSIQITSEE------------------ 95
            |:||   ::.|.|.|.               |.|..||....:...:
  Rat    62 VLQP---SVEPAQPSPQLLLRQASKFLPARFLAAGEPSERQMLLGGDSSPRDSYMCKLPKAVAAA 123

  Fly    96 ----LQRRQEELDRKAAELDRREQQLQGNVPQL----NNWPPLPDNFCVKPCFYQDFEVEIPPEF 152
                |.|:|||||||||||:|:|::||.....|    |||||||....|||||||||..|||.::
  Rat   124 AQAGLLRQQEELDRKAAELERKERELQNTAANLHVRENNWPPLPSWCPVKPCFYQDFSTEIPADY 188

  Fly   153 QKLVKRLYYIWIFYTMTLLANVIGGLI-LLFHAGEFETFFLAIFYTMLFSPASYVCWFRPAYKAF 216
            |::.|.|||:|:.:::||..|::..|. ....|.....|.|:|.:.::|:|.:::||:||.||||
  Rat   189 QRICKMLYYLWMLHSVTLFLNLLACLAWFTSDAANGTAFGLSILWFLIFTPCAFLCWYRPIYKAF 253

  Fly   217 RNDSSFNFMVFFFIYFFQTLYSIVQAVGFNKMGYCGFITAIGQFDGQASGIIVGILLLNVAFCFT 281
            |:|:||:|.||||::|.|.....:|.:|...:|..|::.|:...:  ...:.|.|:::.||..||
  Rat   254 RSDNSFSFFVFFFVFFCQIGIYFIQLIGLPNLGTSGWLAALSTVN--KGPLAVTIIMMVVAGFFT 316

  Fly   282 AVAVANVLMITKIHSIYRSTGASMAKAQAEFTTEFLRNQHVQEAASSA 329
            ..|..::.::.::|:.||.||||..:||.||:.....::..:.|||||
  Rat   317 LCAGLSLFLLQRVHAFYRRTGASFQQAQEEFSQGIFSSRTFRTAASSA 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_001259572.1	SCAMP	125..301	CDD:282056	69/176 (39%)
Scamp2	XP_017451383.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334772
Domainoid	1	1.000	185	1.000	Domainoid score	I3290
eggNOG	1	0.900	-	-		E1_KOG3088
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	279	1.000	Inparanoid score	I2837
OMA	1	1.010	-	-		QHG51893
OrthoDB	1	1.010	-	-		D544579at33208
OrthoFinder	1	1.000	-	-		FOG0000703
OrthoInspector	1	1.000	-	-		otm44415
orthoMCL	1	0.900	-	-		OOG6_101583
Panther	1	1.100	-	-	O	PTHR10687
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X309
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	13	12.810