Protein Alignment Scamp and scamp1

DIOPT Version :9

• Sequence 1: NP_001259572.1
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_001017190.1
• Gene: scamp1 / 549944
• XenbaseID: XB-GENE-974711
• Length: 336
• Species: Xenopus tropicalis
• Alignment Length: 351
• Identity: 161/351 - (45%)
• Similarity: 220/351 - (62%)
• Gaps: 29/351 - (8%)

  Fly     4 SGLDENPFGEPNLDNPFADPAIQQ-ARRLQSGAALVSLEDYNPFEEQAKPQ-LQINSTNTAAVVQ 66
            |.:|.|||.:|:|:|||.||::.| .|.:.||     ||:||||.:...|| .::.....|...|
 Frog     2 SDIDSNPFADPDLNNPFKDPSVTQVTRNVPSG-----LEEYNPFSDSQTPQPAKVKMPTAAPSTQ 61

  Fly    67 PLSQNIPPPQTSSLGASAPSTSIQITSE------ELQRRQEELDRKAAELDRREQQLQG-NVP-- 122
            |...|  |.:       .||...||:.|      ||.:|||||::|||||||||:::|. |.|
 Frog    62 PAIMN--PTE-------EPSAYNQISKEHAIAQAELLKRQEELEKKAAELDRREREMQSLNQPGG 117

  Fly   123 QLNNWPPLPDNFCVKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLI-LLFHAGE 186
            :.|||||||.||.|.|||||||.|:||.||||.||.:||:|:|:|:||..|:.|.|. ....:|.
 Frog   118 RKNNWPPLPGNFPVGPCFYQDFSVDIPVEFQKTVKIMYYLWMFHTVTLFVNIFGCLAWFCVDSGR 182

  Fly   187 FETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFNKMGYC 251
            ...|.|||.:.:||:|.|:|||:||.|.|||:||||.|.||||:|..|....::||.||...|.|
 Frog   183 GVDFGLAILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFGVHVLQAAGFQGWGNC 247

  Fly   252 GFITAIGQFDGQASGIIVGILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQAEFTTEF 316
            |:|:|:   .|....|.|||:::.:|..|||.||.:::|..|:|.:||:||||..|||.||.|..
 Frog   248 GWISAL---TGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFEKAQQEFATGV 309

  Fly   317 LRNQHVQEAASSAVNTAINSQFNNSR 342
            :.|:.||.||::|.::|..:.|..::
 Frog   310 MSNKTVQTAAANAASSAAQNAFKGNQ 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_001259572.1	SCAMP	125..301	CDD:282056	90/176 (51%)
scamp1	NP_001017190.1	SCAMP	119..294	CDD:282056	90/177 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	189	1.000	Domainoid score	I3238
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H37975
Inparanoid	1	1.050	291	1.000	Inparanoid score	I2740
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D544579at33208
OrthoFinder	1	1.000	-	-		FOG0000703
OrthoInspector	1	1.000	-	-		oto102239
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3229
SonicParanoid	1	1.000	-	-		X309
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.090