DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scamp and clk3

DIOPT Version :10

Sequence 1:NP_573023.2 Gene:Scamp / 32470 FlyBaseID:FBgn0040285 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001011462.1 Gene:clk3 / 496952 XenbaseID:XB-GENE-5861130 Length:498 Species:Xenopus tropicalis


Alignment Length:60 Identity:14/60 - (23%)
Similarity:25/60 - (41%) Gaps:16/60 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RKAAELD--------RREQQLQGNVPQLNNWPPLPDNFCVKPCFYQDFEV--EIPPEFQK 154
            |:||:|:        .|:|..:.....:.:|.....:.|:.      ||:  :...||||
 Frog   201 REAAQLEINVLEKIKERDQDNKNMCVLMRDWFDFHGHVCIA------FELLGKSTFEFQK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScampNP_573023.2 SCAMP 125..301 CDD:461193 8/32 (25%)
clk3NP_001011462.1 Protein Kinases, catalytic domain 148..478 CDD:473864 14/60 (23%)

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