Protein Alignment Scamp and scamp2

DIOPT Version :9

• Sequence 1: NP_001259572.1
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_001001223.1
• Gene: scamp2 / 407901
• XenbaseID: XB-GENE-955377
• Length: 330
• Species: Xenopus tropicalis
• Alignment Length: 364
• Identity: 137/364 - (37%)
• Similarity: 205/364 - (56%)
• Gaps: 61/364 - (16%)

  Fly     4 SGLDENPFGEPNLDNPFADPAIQQARRLQSGAALVSLEDYNPFEE------------QAKPQLQI 56
            ||.|.|||.:|...|||.||::.|......|    :||::|||.|            .|:|
 Frog     2 SGYDTNPFADPVDVNPFQDPSVTQITAGNHG----NLEEFNPFSEGSHLTNPNQKTIPAQP---- 58

  Fly    57 NSTNTAAVVQPLSQNIPPPQTSSLGASAPSTSIQITSEELQRRQEELDRKAAELDRREQQLQG-- 119
             :.:..||:||..:  |.||.:::.|..          .|.::||||:||||:|||:||:::.
 Frog    59 -AQSQPAVLQPSVE--PTPQAAAMAAQT----------GLLQQQEELERKAADLDRKEQEMRNVN 110

  Fly   120 -NVPQLNNWPPLPDNFCVKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVI-------- 175
             |:.| |||||||....:|||||||..|:||.::|:..|.|||:|:.:|.||..|::
 Frog   111 INLRQ-NNWPPLPPKCPIKPCFYQDISVDIPADYQRTCKMLYYLWMLHTFTLFLNLLACLSYFTA 174

  Fly   176 ---GGLILLFHAGEFETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLY 237
               ||:          .|.|:|.:.::|:|.:::||:||.|||||.||||:|.|||.|:|.|.:.
 Frog   175 VSTGGV----------DFGLSILWFVMFTPCAFLCWYRPIYKAFRTDSSFSFFVFFIIFFCQIVI 229

  Fly   238 SIVQAVGFNKMGYCGFITAIGQFDGQASGIIVGILLLNVAFCFTAVAVANVLMITKIHSIYRSTG 302
            .|:||||....|..|:|.|:...   .:.|.|.::::.||..||..:|.::.::.::||:||.||
 Frog   230 YIIQAVGIPGWGDSGWIMALSMI---KTNIAVTVIMIVVASFFTVCSVFSLFLLKRVHSMYRRTG 291

  Fly   303 ASMAKAQAEFTTEFLRNQHVQEAASSAVNTAINSQFNNS 341
            ||..:||.||:...|.|::||.||:.|...|....|..:
 Frog   292 ASFQRAQEEFSQGILSNRNVQNAAAGAATAAARGAFQGN 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_001259572.1	SCAMP	125..301	CDD:282056	74/186 (40%)
scamp2	NP_001001223.1	rne	<55..>117	CDD:236766	26/79 (33%)
		SCAMP	115..290	CDD:367838	75/188 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D544579at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010