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Protein Alignment Scamp and Clk2
DIOPT Version :10
| Sequence 1: | NP_573023.2 |
Gene: | Scamp / 32470 |
FlyBaseID: | FBgn0040285 |
Length: | 343 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_008759408.1 |
Gene: | Clk2 / 365842 |
RGDID: | 1359711 |
Length: | 540 |
Species: | Rattus norvegicus |
| Alignment Length: | 72 |
Identity: | 17/72 - (23%) |
| Similarity: | 31/72 - (43%) |
Gaps: | 20/72 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 SGLDENPFGEPNLDNPFADPAIQQARRLQSGA--ALVSLEDYNPFEEQAKPQLQINSTNTAAVVQ 66
|.|.|..||. .:|.....:.|| ||..:::...::|.|: |:|| |::
Rat 207 STLGEGTFGR----------VVQCVDHRRGGARVALKIIKNVEKYKEAAR--LEIN------VLE 253
Fly 67 PLSQNIP 73
.:::..|
Rat 254 KINEKDP 260
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Scamp | NP_573023.2 |
SCAMP |
125..301 |
CDD:461193 |
|
| Clk2 | XP_008759408.1 |
PKc_CLK2 |
190..519 |
CDD:271117 |
17/72 (24%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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