DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scamp and SCAMP5

DIOPT Version :9

Sequence 1:NP_001259572.1 Gene:Scamp / 32470 FlyBaseID:FBgn0040285 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_006720483.1 Gene:SCAMP5 / 192683 HGNCID:30386 Length:253 Species:Homo sapiens


Alignment Length:225 Identity:100/225 - (44%)
Similarity:139/225 - (61%) Gaps:9/225 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 GNV--PQLNNWPPLPDNFCVKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLILL 181
            ||:  .::||:||||....:|||||||||.:|||:...:.|||||:|:..::||..|::|.|..|
Human    16 GNIMAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAWL 80

  Fly   182 FHAGEFETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFN 246
            ...|....|.||..:.:||:|.||||||||.||||:.||||:||.|||.:..|.:.||:||||..
Human    81 IGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAVGIP 145

  Fly   247 KMGYCGFITAIGQFDGQASGIIVG--ILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQ 309
            ..|.||:|..|..|     |..:|  :::|.....||.:||.:.:.::.:|..||.:|.|.:|||
Human   146 GWGVCGWIATISFF-----GTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSGGSFSKAQ 205

  Fly   310 AEFTTEFLRNQHVQEAASSAVNTAINSQFN 339
            .|:||...:|.|||:||.:|...|.....|
Human   206 EEWTTGAWKNPHVQQAAQNAAMGAAQGAMN 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScampNP_001259572.1 SCAMP 125..301 CDD:282056 81/177 (46%)
SCAMP5XP_006720483.1 SCAMP 24..197 CDD:282056 81/177 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141107
Domainoid 1 1.000 185 1.000 Domainoid score I3381
eggNOG 1 0.900 - - E1_KOG3088
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D544579at33208
OrthoFinder 1 1.000 - - FOG0000703
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X309
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.710

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